Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05479 and RBAM_033110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:58
# Commandline: needle
# -asequence pep-align/BSNT_05479___rbsA.1.9828.seq
# -bsequence pep-align/RBAM_033110___rbsA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05479___rbsA-RBAM_033110___rbsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05479___rbsA-RBAM_033110___rbsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05479___rbsA
# 2: RBAM_033110___rbsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 497
# Identity: 410/497 (82.5%)
# Similarity: 459/497 (92.4%)
# Gaps: 4/497 ( 0.8%)
# Score: 2108.0
#
#
#=======================================
BSNT_05479___ 1 MQIEMKDIHKAFGKNQVLSGVSFQLLPGEVHALMGENGAGKSTLMNILTG 50
|.|.|.|||||||||||||||||:|||||:||||||||||||||||:|||
RBAM_033110__ 1 MHIGMTDIHKAFGKNQVLSGVSFELLPGEIHALMGENGAGKSTLMNLLTG 50
BSNT_05479___ 51 LHKSDQGQISINGNETYFSNPKEAEQHGIAFIHQELNIWPEMTVLENLFI 100
|::.|:|.|:|||....||||||||:||||||||||||||:|||||||||
RBAM_033110__ 51 LYRLDKGNITINGTNMSFSNPKEAEKHGIAFIHQELNIWPDMTVLENLFI 100
BSNT_05479___ 101 GKEISSKLGVLQTRKMKALAKEQFDKLSVSLSLDQEAGECSVGQQQMIEI 150
|||:::..|||:|:|||||||.|.:||.|||.||:|||:|||||||||||
RBAM_033110__ 101 GKELTTAFGVLETKKMKALAKSQLEKLGVSLPLDREAGQCSVGQQQMIEI 150
BSNT_05479___ 151 AKALMTNAEVIIMDEPTAALTEREISKLFEVITALKKNGVSIVYISHRME 200
|||||||||||||||||||||||||||||:|:||||::||||||||||||
RBAM_033110__ 151 AKALMTNAEVIIMDEPTAALTEREISKLFDVMTALKRDGVSIVYISHRME 200
BSNT_05479___ 201 EIFAICDRITIMRDGKTVDTTNISETDFDDVVKKMVGRELTERYPKRTPS 250
|||:|||||||||||.||||.::.:|:||:|||||||||||:|||.||||
RBAM_033110__ 201 EIFSICDRITIMRDGLTVDTAHMKDTNFDEVVKKMVGRELTDRYPTRTPS 250
BSNT_05479___ 251 LGDKVFEVKNASVKGSFEDVSFYVRSGEIVGVSGLMGAGRTEMMRALFGV 300
|||||.||||||.||||..:||:|.:|||:||||||||||||:||||||:
RBAM_033110__ 251 LGDKVLEVKNASKKGSFSQISFHVSAGEILGVSGLMGAGRTEIMRALFGI 300
BSNT_05479___ 301 DRLDTGEIWIAGKKTAIKNPQEAVKKGLGFITENRKDEGLLLDTSIRENI 350
||||:|||||:|:||.|:.|.:|::||||.||||||||||||||||||||
RBAM_033110__ 301 DRLDSGEIWISGRKTGIRGPYDAIRKGLGLITENRKDEGLLLDTSIRENI 350
BSNT_05479___ 351 ALPNLSSFSPKGLIDHKREAEFVDLLIKRLTIKTASPETHARHLSGGNQQ 400
:||||:||||||:||.|||||||:|||||||||||||||.||||||||||
RBAM_033110__ 351 SLPNLTSFSPKGIIDRKREAEFVELLIKRLTIKTASPETAARHLSGGNQQ 400
BSNT_05479___ 401 KVVIAKWIGIGLKVLILDEPTRGVDVGAKREIYTLMNELTERGVAIIMVS 450
|||||||||||.|||||||||||||||||||||:||||||:|||||||||
RBAM_033110__ 401 KVVIAKWIGIGPKVLILDEPTRGVDVGAKREIYSLMNELTDRGVAIIMVS 450
BSNT_05479___ 451 SELPEILGMSDRIIVVHEGRISGEIHAREATQERIMTLATGGR---- 493
|||||||||||||||||||||||||:|..||||.||||||||:
RBAM_033110__ 451 SELPEILGMSDRIIVVHEGRISGEINAAGATQEHIMTLATGGQQYEN 497
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