Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05478 and RBAM_033100

See DNA alignment / Visit BSNT_05478 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:58
# Commandline: needle
#    -asequence pep-align/BSNT_05478___rbsD.1.9828.seq
#    -bsequence pep-align/RBAM_033100___rbsD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05478___rbsD-RBAM_033100___rbsD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05478___rbsD-RBAM_033100___rbsD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05478___rbsD
# 2: RBAM_033100___rbsD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 131
# Identity:      97/131 (74.0%)
# Similarity:   113/131 (86.3%)
# Gaps:           0/131 ( 0.0%)
# Score: 495.0
# 
#
#=======================================

BSNT_05478___      1 MKKHGILNSHLAKILADLGHTDKIVIADAGLPVPDGVLKIDLSLKPGLPA     50
                     |||||:||||:||:||||||||.|.|||||||||||..||||||..|:||
RBAM_033100__      1 MKKHGMLNSHIAKVLADLGHTDLIAIADAGLPVPDGAPKIDLSLTAGVPA     50

BSNT_05478___     51 FQDTAAVLAEEMAVEKVIAAAEIKASNQENARFLENLFSEQEIEYLSHEE    100
                     |:|..:::|.||||||||||:|||.:|.|||.|:|:.||.|.|||:||||
RBAM_033100__     51 FRDVTSLVAGEMAVEKVIAASEIKDANPENASFIESHFSAQTIEYMSHEE    100

BSNT_05478___    101 FKLLTKEAKAVIRTGEFTQYANCILQAGVLF    131
                     ||.||::|||||||||.|.||||||||||:|
RBAM_033100__    101 FKRLTQKAKAVIRTGEMTPYANCILQAGVIF    131


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