Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05474 and RBAM_033080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:57
# Commandline: needle
# -asequence pep-align/BSNT_05474___rbsR.1.9828.seq
# -bsequence pep-align/RBAM_033080___rbsR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05474___rbsR-RBAM_033080___rbsR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05474___rbsR-RBAM_033080___rbsR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05474___rbsR
# 2: RBAM_033080___rbsR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 330
# Identity: 261/330 (79.1%)
# Similarity: 291/330 (88.2%)
# Gaps: 1/330 ( 0.3%)
# Score: 1327.0
#
#
#=======================================
BSNT_05474___ 1 -MATIKDVAGAAGVSVATVSRVLNDNGYVHEVTRTRVIAAMAKLNYYPNE 49
:|||||||||||||||||||||||||||||.|||:|:.||.||||||||
RBAM_033080__ 1 MLATIKDVAGAAGVSVATVSRVLNDNGYVHEDTRTKVMLAMEKLNYYPNE 50
BSNT_05474___ 50 VARSLYKRESRLIGLLLPDITNPFFPQLARGAEDELNREGYRLIFGNSDE 99
||||||||||||:|||||||||||||||||||||||.|||||||.|||||
RBAM_033080__ 51 VARSLYKRESRLVGLLLPDITNPFFPQLARGAEDELQREGYRLIIGNSDE 100
BSNT_05474___ 100 ELKKELEYLQTFKQNHVAGIIAATNYPDLEEYSGMNYPVVFLDRTLEGAP 149
||:|||:||||||||.||||:|||:||||.||||..|||||||||.||||
RBAM_033080__ 101 ELEKELDYLQTFKQNQVAGILAATHYPDLPEYSGSLYPVVFLDRTKEGAP 150
BSNT_05474___ 150 SVSSDGYTGGKLAAQAIIHGKSQRITLLRGPAHLPTAQDRFNGALEILKQ 199
||.|||..|||.||:.::.|||..|||::|||||||||:||||||::|::
RBAM_033080__ 151 SVFSDGRAGGKRAAEEMLRGKSTSITLVKGPAHLPTAQERFNGALDVLQK 200
BSNT_05474___ 200 AEVEFQVIETASFSIKDAQSMAKELFAAYPATDGVIASNDIQAAAVLHEA 249
|...|.||..||||||||..:|:|||||||.||||||||||.||||||||
RBAM_033080__ 201 AGAPFNVISAASFSIKDAAILAEELFAAYPETDGVIASNDIAAAAVLHEA 250
BSNT_05474___ 250 LRRGKNVPEDIQIIGYDDIPQSGLLFPPLSTIKQPAYDMGREAAKLLLGI 299
||.||.|||:||||||||||||.|||||||||:||||:||::||.|||.:
RBAM_033080__ 251 LRLGKKVPEEIQIIGYDDIPQSRLLFPPLSTIRQPAYEMGKQAANLLLQL 300
BSNT_05474___ 300 IKKQPLAETAIQMPVTYIGRKTTRKEDYDA 329
|||:|..|||||||||||.|:||||:|:..
RBAM_033080__ 301 IKKEPPKETAIQMPVTYIRRQTTRKDDHHE 330
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