Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05471 and RBAM_033030

See DNA alignment / Visit BSNT_05471 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:57
# Commandline: needle
#    -asequence pep-align/BSNT_05471___ywtA.1.9828.seq
#    -bsequence pep-align/RBAM_033030___ywtA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05471___ywtA-RBAM_033030___ywtA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05471___ywtA-RBAM_033030___ywtA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05471___ywtA
# 2: RBAM_033030___ywtA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:     140/149 (94.0%)
# Similarity:   144/149 (96.6%)
# Gaps:           0/149 ( 0.0%)
# Score: 693.0
# 
#
#=======================================

BSNT_05471___      1 MFGSDLYIALILGVLLSLIFAEKTGIVPAGLVVPGYLGLVFNQPVFILLV     50
                     ||||||||:||||||:||||||||||||||||||||||||||||||||||
RBAM_033030__      1 MFGSDLYISLILGVLISLIFAEKTGIVPAGLVVPGYLGLVFNQPVFILLV     50

BSNT_05471___     51 LLVSLLTYVIVKYGLSKFMILYGRRKFAAMLITGIVLKIAFDFLYPIVPF    100
                     ||||||||||||||||:||||||||||||||||||.||||.|||||||||
RBAM_033030__     51 LLVSLLTYVIVKYGLSRFMILYGRRKFAAMLITGICLKIALDFLYPIVPF    100

BSNT_05471___    101 EIAEFRGIGIIVPGLIANTIQKQGLTITFGSTLLLSGATFAIMFVYYLI    149
                     ||:||||||||||||||||||||||||||.|||.||||||||||.||||
RBAM_033030__    101 EISEFRGIGIIVPGLIANTIQKQGLTITFASTLFLSGATFAIMFAYYLI    149


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