Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05469 and RBAM_033010

See DNA alignment / Visit BSNT_05469 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:57
# Commandline: needle
#    -asequence pep-align/BSNT_05469___ywtC.1.9828.seq
#    -bsequence pep-align/RBAM_033010___ywtC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05469___ywtC-RBAM_033010___ywtC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05469___ywtC-RBAM_033010___ywtC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05469___ywtC
# 2: RBAM_033010___ywtC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 55
# Identity:      38/55 (69.1%)
# Similarity:    43/55 (78.2%)
# Gaps:           2/55 ( 3.6%)
# Score: 192.0
# 
#
#=======================================

BSNT_05469___      1 MKFVKAIWPFVAVAIVFMFMSAFKFNDQLTDQEKQKIDMEMNKIQQQEEP     50
                     ||.:||.|||.|:.:|||||||||:|||||||||||||.||.|| |||:.
RBAM_033010__      1 MKIIKAGWPFAAIIMVFMFMSAFKYNDQLTDQEKQKIDTEMQKI-QQEDT     49

BSNT_05469___     51 VNANK     55
                     ..|. 
RBAM_033010__     50 AGAK-     53


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