Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05469 and RBAM_033010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:57
# Commandline: needle
# -asequence dna-align/BSNT_05469___ywtC.1.9828.seq
# -bsequence dna-align/RBAM_033010___ywtC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05469___ywtC-RBAM_033010___ywtC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05469___ywtC-RBAM_033010___ywtC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05469___ywtC
# 2: RBAM_033010___ywtC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 175
# Identity: 126/175 (72.0%)
# Similarity: 126/175 (72.0%)
# Gaps: 20/175 (11.4%)
# Score: 447.0
#
#
#=======================================
BSNT_05469___ 1 ATGAAATTTGTCAAAGCTATCTGGCCGTTTGTTGCCGTAGCCATC----- 45
||||||.|..|.|||||....||||||| ||||| ||.|||
RBAM_033010__ 1 ATGAAAATCATTAAAGCGGGATGGCCGT---TTGCC---GCGATCATTAT 44
BSNT_05469___ 46 -GTGTTCATGTTTATGTCAGCTTTTAAATTCAATGATCAGCTGACAGATC 94
||.||.||||||||||||||.|||||||.||||||||||||.|||||||
RBAM_033010__ 45 GGTATTTATGTTTATGTCAGCGTTTAAATACAATGATCAGCTCACAGATC 94
BSNT_05469___ 95 AGGAAAAACAGAAGATTGATATGGAAATGAATAAAATCCAACAGCAGGAA 144
||||||||||.||.|||||.|.|||||||.|.||.||.||.||..||||.
RBAM_033010__ 95 AGGAAAAACAAAAAATTGACACGGAAATGCAAAAGATTCAGCAAGAGGAC 144
BSNT_05469___ 145 GAACCGGTAAATGC-CAATAAATAA 168
..|.||| || || ||||||
RBAM_033010__ 145 ACAGCGG-----GCGCA--AAATAA 162
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