Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04424 and RBAM_032990

See DNA alignment / Visit BSNT_04424 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:53
# Commandline: needle
#    -asequence pep-align/BSNT_04424___yttA.1.9828.seq
#    -bsequence pep-align/RBAM_032990___yttA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04424___yttA-RBAM_032990___yttA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04424___yttA-RBAM_032990___yttA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04424___yttA
# 2: RBAM_032990___yttA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     135/251 (53.8%)
# Similarity:   187/251 (74.5%)
# Gaps:          10/251 ( 4.0%)
# Score: 704.5
# 
#
#=======================================

BSNT_04424___      1 -MEMVLAFLGFLACLIALGYGLYHLVRYVLKKEKRFSKRLFWPLFIGGLV     49
                      |...:|.:|.||.|.|:|||::||:....||||||||:|||||.|||.:
RBAM_032990__      1 MMSNAIAIIGCLAFLCAVGYGIFHLICKAAKKEKRFSKKLFWPLLIGGFI     50

BSNT_04424___     50 LLFTGAALAEPDTAAANAEKKYSALNAEYKNLTKEHEELEKEYKSVSSEA     99
                     ||.|||:|||||.:|..||:|||.|:..|:.|||||:.|||:|:|:|:.|
RBAM_032990__     51 LLLTGASLAEPDASAVKAEEKYSTLDTAYQKLTKEHQALEKKYESISAAA    100

BSNT_04424___    100 KKLKDNKE--DQDKLEKLKNENSDLKKTQKSLKAEIKELQENQKQLKEDA    147
                     :|.|...|  :::||.||..|.|:||||.||||.:.::|:.:||:|::.|
RBAM_032990__    101 EKEKSEAEAGNEEKLSKLSQEISELKKTNKSLKQDNEKLKNSQKKLEKTA    150

BSNT_04424___    148 KTAKAENETLRQDKTKLENQLKETESQTASSHEDTGSSSNNTSKSDETKT    197
                     :|.::||:||::.|.       |.|::|:.:.|...:::.::....|||.
RBAM_032990__    151 ETLQSENKTLKRQKA-------EAETKTSENAETAQNNAPSSGGHAETKA    193

BSNT_04424___    198 ADKAEGCNIKGSKNGIYHTPGSTYYDRTTDPAEMFCSVEEAEAAGYRAPK    247
                     |..::||:||||:||||||||||||||||||||||||:|:|.||||||||
RBAM_032990__    194 AGTSQGCDIKGSRNGIYHTPGSTYYDRTTDPAEMFCSIEDAVAAGYRAPK    243

BSNT_04424___    248 R    248
                     |
RBAM_032990__    244 R    244


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