Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05466 and RBAM_032980

See DNA alignment / Visit BSNT_05466 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:57
# Commandline: needle
#    -asequence pep-align/BSNT_05466___ywtE.1.9828.seq
#    -bsequence pep-align/RBAM_032980___ywtE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05466___ywtE-RBAM_032980___ywtE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05466___ywtE-RBAM_032980___ywtE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05466___ywtE
# 2: RBAM_032980___ywtE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     219/286 (76.6%)
# Similarity:   248/286 (86.7%)
# Gaps:           1/286 ( 0.3%)
# Score: 1144.0
# 
#
#=======================================

BSNT_05466___      1 MKCIAIDLDGTLLNKESVISAENREAIKRAVDAGILVTICTGRATFDVKA     50
                     ||.|||||||||||.:||||.|||.|::||.:|||||.||||||||||||
RBAM_032980__      1 MKLIAIDLDGTLLNSDSVISPENRAALQRADEAGILVAICTGRATFDVKA     50

BSNT_05466___     51 LLDDLDIPIIAANGGTIHDTGYRLISRTLMDQEAGKAIADYLLSKNIYFE    100
                     ||.|||||||||||||:||.||||:||.||||:|||.||.||..|:||||
RBAM_032980__     51 LLKDLDIPIIAANGGTVHDKGYRLVSRLLMDQQAGKDIAAYLTDKDIYFE    100

BSNT_05466___    101 VYTDDHLLSPFDGKAKLHAELDILKSANPNEQTDELWQGAMTQFKQFGIK    150
                     |||||||||||||::||.|||||||||||.|....||:||.|||||||||
RBAM_032980__    101 VYTDDHLLSPFDGESKLQAELDILKSANPKEDIHTLWEGAKTQFKQFGIK    150

BSNT_05466___    151 PIPHIESVFEGGENIYKLLCFSFDMDKLKQAKEELKHHKKLAQTSSGKHI    200
                     |:..|:::|.|.|::||||||||||:||:.||||:.||.||:||||||||
RBAM_032980__    151 PVQDIQAIFNGDEHVYKLLCFSFDMEKLRNAKEEITHHPKLSQTSSGKHI    200

BSNT_05466___    201 IEILPASSGKGRALTKLADIYGIETQDIYAIGDSPNDLSMFEVSGHRIAM    250
                     ||||||.||||||||:||.:||||.||||||||||||.||||.:|:||||
RBAM_032980__    201 IEILPAGSGKGRALTELASLYGIEKQDIYAIGDSPNDFSMFEAAGNRIAM    250

BSNT_05466___    251 ENAIDELKEKSTFVTKSNDENGVAYFIDQLLSGQYA    286
                     .|||||||||||::|||||||||||||::||.... 
RBAM_032980__    251 GNAIDELKEKSTYITKSNDENGVAYFINRLLDNDQ-    285


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