Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05465 and RBAM_032970

See DNA alignment / Visit BSNT_05465 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:57
# Commandline: needle
#    -asequence pep-align/BSNT_05465___ywtF.1.9828.seq
#    -bsequence pep-align/RBAM_032970___ywtF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05465___ywtF-RBAM_032970___ywtF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05465___ywtF-RBAM_032970___ywtF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05465___ywtF
# 2: RBAM_032970___ywtF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 328
# Identity:     250/328 (76.2%)
# Similarity:   295/328 (89.9%)
# Gaps:           0/328 ( 0.0%)
# Score: 1321.0
# 
#
#=======================================

BSNT_05465___      1 MEERLQHKKKKRRLKKWVKFTIGLFAILIIVTGSIGTYAYIKLNNASKQA     50
                     ||||.|.:||||||:|||||.:...|.|:::.||:||||::|||||:|:|
RBAM_032970__      1 MEERSQRRKKKRRLRKWVKFVLVFAAFLLVIAGSVGTYAFVKLNNATKEA     50

BSNT_05465___     51 HIDLNENGQSVKRIKEFDPKKDSFTVLLLGIDSRNSKGETVDDARSDANV    100
                     |:.|:...||||||||||||||||||||||||:|::|||:||||||||||
RBAM_032970__     51 HVSLDRGDQSVKRIKEFDPKKDSFTVLLLGIDARDNKGESVDDARSDANV    100

BSNT_05465___    101 LVTFNRKNKSATMLSIPRDSYVNIPGYGYDKFTHAHAYGGVKLSAKTIEN    150
                     |||||||.|:||||||||||||||||:|||||.|||||||..|:.||:||
RBAM_032970__    101 LVTFNRKKKTATMLSIPRDSYVNIPGHGYDKFAHAHAYGGYNLTYKTVEN    150

BSNT_05465___    151 LLDIPVDYVIESNFDAFKDVVDELNGVSINVKNEKIVNQIKKDTKGKVTL    200
                     :||||||||:|||||||:|||:|||||::|||::||.::||.||||||.|
RBAM_032970__    151 MLDIPVDYVVESNFDAFRDVVNELNGVTVNVKSQKIADRIKVDTKGKVVL    200

BSNT_05465___    201 KTGVQTLNGEEALAYVRTRKADTDFQRGQRQMEVLNAIIKKSKSLSSIPA    250
                     |.|||||:||:|||||||||||||..|||||||||:|||||||||||||:
RBAM_032970__    201 KPGVQTLDGEQALAYVRTRKADTDLMRGQRQMEVLSAIIKKSKSLSSIPS    250

BSNT_05465___    251 YDDIVDSLGENLKMNLSLNDAIGLFPFITSLKSVDTEQLTGSDMYLYSSR    300
                     |||||||||:|||||||||||||||||||||||||:.||||||.|:|:.:
RBAM_032970__    251 YDDIVDSLGKNLKMNLSLNDAIGLFPFITSLKSVDSLQLTGSDSYIYTPQ    300

BSNT_05465___    301 ERKKLYYLKLDSEKLEEVKTELKNDIDN    328
                     ..|.:||.||:.|.|:||||:||||:|.
RBAM_032970__    301 YGKNIYYFKLNEENLQEVKTKLKNDLDA    328


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