Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05464 and RBAM_032960
See
DNA alignment /
Visit
BSNT_05464 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:56
# Commandline: needle
# -asequence pep-align/BSNT_05464.1.9828.seq
# -bsequence pep-align/RBAM_032960___ywtG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05464-RBAM_032960___ywtG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05464-RBAM_032960___ywtG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05464
# 2: RBAM_032960___ywtG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 470
# Identity: 337/470 (71.7%)
# Similarity: 360/470 (76.6%)
# Gaps: 79/470 (16.8%)
# Score: 1684.0
#
#
#=======================================
BSNT_05464 1 MKK-QSNIWLYFFGALGGALYGYDTGVISGAILFMKKELGLNAFTEGLVV 49
||. .||.||||||||||||||||||||||||||||||||||||||||||
RBAM_032960__ 1 MKSIHSNKWLYFFGALGGALYGYDTGVISGAILFMKKELGLNAFTEGLVV 50
BSNT_05464 50 SSLLVGAILGSGAAGKLTDRFGRKKAIMTAALLFCIGGLGVALAPNTGVM 99
||||.|||||||.||||||||||:||||.|||||||||||||.||||.||
RBAM_032960__ 51 SSLLAGAILGSGFAGKLTDRFGRRKAIMGAALLFCIGGLGVAFAPNTEVM 100
BSNT_05464 100 VLFRIILGLAVGTSTTIVPLYLSELAPKHKRGALSSLNQLMITVGILLSY 149
|||||||||||||||||||||||||||||||||||||||||||||||:||
RBAM_032960__ 101 VLFRIILGLAVGTSTTIVPLYLSELAPKHKRGALSSLNQLMITVGILVSY 150
BSNT_05464 150 IVNYIFADAEAWRWMLGLAAVPSLLLLIGILFMPESPRWLFTNGEESKAK 199
|||||||||.|||||||||.|||::|||||||||||||||||.|:|.||:
RBAM_032960__ 151 IVNYIFADAGAWRWMLGLAVVPSVILLIGILFMPESPRWLFTIGKEEKAR 200
BSNT_05464 200 NILEKLRGTTDIDQEIHDIKEAEKQDEGGLKELFDPWVRPALIAGLGLAF 249
.||..||||.:||.||..:|||||::||||||||:|||||||||||||||
RBAM_032960__ 201 EILSSLRGTKNIDDEIDQMKEAEKENEGGLKELFEPWVRPALIAGLGLAF 250
BSNT_05464 250 LQQFIGTNTIIYYAPKTFTNVGFGNSASILGTVGIGTVNVVMTLVAIKII 299
|||||||||||||||||||:||||||||||||||||.|||:|||.|||:|
RBAM_032960__ 251 LQQFIGTNTIIYYAPKTFTSVGFGNSASILGTVGIGAVNVIMTLAAIKVI 300
BSNT_05464 300 DKIGRKPLLLFGNAGMVISLIVLALVNLFFDNTPAASWTTVICLGVFIVV 349
||||||||||.|||||||||:|||.|||||:::.|||||||||||:||:|
RBAM_032960__ 301 DKIGRKPLLLAGNAGMVISLLVLAAVNLFFEHSAAASWTTVICLGLFIIV 350
BSNT_05464 350 FAVSWGPVVWVMLPELFLLHVRGIGTGVSTSDGNQLFIPDLCRDRYHGVL 399
|||||||.|||||||||.|||||||||||| |.: :.|.|
RBAM_032960__ 351 FAVSWGPAVWVMLPELFPLHVRGIGTGVST-----LML-------HAGTL 388
BSNT_05464 400 ICPI---------------------------------------------- 403
|..:
RBAM_032960__ 389 IVSLTYPMLMEAVGISYLFLIYAAIGILAFLFVRFKVTETKGKSLEEIEQ 438
BSNT_05464 403 -------------------- 403
RBAM_032960__ 439 DLKSRNGGSGSESNRRTVHP 458
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.