Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05460 and RBAM_032930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:56
# Commandline: needle
# -asequence pep-align/BSNT_05460___gerBB.1.9828.seq
# -bsequence pep-align/RBAM_032930___gerBB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05460___gerBB-RBAM_032930___gerBB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05460___gerBB-RBAM_032930___gerBB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05460___gerBB
# 2: RBAM_032930___gerBB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 368
# Identity: 252/368 (68.5%)
# Similarity: 305/368 (82.9%)
# Gaps: 0/368 ( 0.0%)
# Score: 1373.0
#
#
#=======================================
BSNT_05460___ 1 MRQSEDKLTFMQTLIMVSSTMIGAGVLTLSRSAAETDSPIGWIMILLQGV 50
|::.||||:|||||:|||.||||||||||.||||..|||.|||:||:|.|
RBAM_032930__ 1 MKKPEDKLSFMQTLLMVSGTMIGAGVLTLPRSAATADSPSGWIIILVQSV 50
BSNT_05460___ 51 IFIIFSLLFLPFLQRNSGKTIFELNSIAAGKVVGFFLNVFISLYFIGIVC 100
:||...|||:||||:|||:||:|||....|:.:|..||:|||.||:..||
RBAM_032930__ 51 VFIGIVLLFMPFLQKNSGETIYELNQSIMGRAIGSLLNLFISCYFVVTVC 100
BSNT_05460___ 101 FQTRILGEVVGFFLLKNTPMAVVVIIFLAVAIYHVAGGVYPIAKVYAYIF 150
||.|.||||:.:||||||||.||:.|||||.||||.||||||:|:|||:|
RBAM_032930__ 101 FQARFLGEVINYFLLKNTPMGVVIFIFLAVGIYHVTGGVYPISKLYAYLF 150
BSNT_05460___ 151 PITIIIFLMLLMFSFRLFQLDFIRPVFEGGFQSFFSLFPKTLLYFSGFEI 200
||.|:|.:.||:||.|||:|||:|||.|||::|||.|||:|||||||.|:
RBAM_032930__ 151 PIAIVILITLLIFSLRLFKLDFVRPVMEGGYKSFFELFPRTLLYFSGLEV 200
BSNT_05460___ 201 IFYLVPFMKDPKQVKKAVAFGIVTSTVFYSITLFIVIGCMSVAEAKTVTW 250
|.|||||||:|||.|||..|||..:::|||.||.:||||||||||||||:
RBAM_032930__ 201 ILYLVPFMKNPKQAKKAAVFGIAGASIFYSFTLLVVIGCMSVAEAKTVTY 250
BSNT_05460___ 251 PTISLIHALEIPGIFIERFDLFLQLTWTAQQFACMLGSFKGAHIGLTDIF 300
|||||||||||.||||||||:||.:|||.|||.||||||||||:||..||
RBAM_032930__ 251 PTISLIHALEIRGIFIERFDIFLLITWTCQQFTCMLGSFKGAHLGLNTIF 300
BSNT_05460___ 301 HLKNKNNPWLLTALLAVTFFLSMFPEDLNAVFYYGTLLGYIFLGIIVIPF 350
.||||||.||:.:||||||.|||:|:|:|:||.:..:|||.|..:|:|||
RBAM_032930__ 301 RLKNKNNAWLMGSLLAVTFGLSMYPDDINSVFAFANILGYAFFAVIMIPF 350
BSNT_05460___ 351 FIWFLSWIQKKLGRGQLQ 368
.|||:||::|.:||.|..
RBAM_032930__ 351 LIWFVSWMKKIVGRKQTS 368
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