Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05457 and RBAM_032910

See DNA alignment / Visit BSNT_05457 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:56
# Commandline: needle
#    -asequence pep-align/BSNT_05457___pmi.1.9828.seq
#    -bsequence pep-align/RBAM_032910___pmi.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05457___pmi-RBAM_032910___pmi.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05457___pmi-RBAM_032910___pmi.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05457___pmi
# 2: RBAM_032910___pmi
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity:     239/316 (75.6%)
# Similarity:   275/316 (87.0%)
# Gaps:           0/316 ( 0.0%)
# Score: 1336.0
# 
#
#=======================================

BSNT_05457___      1 MTQSPIFLTPVFKEKIWGGTALRDRFGYSIPSESTGECWAISAHPKGPST     50
                     |||.||||.||.|||:||||.||:||||.||||:|||||||||||.|.||
RBAM_032910__      1 MTQEPIFLQPVCKEKLWGGTLLRERFGYDIPSETTGECWAISAHPHGMST     50

BSNT_05457___     51 VANGPYKGKTLIELWEEHREVFGGVEGDRFPLLKKLLDVKEGTSIKVHPD    100
                     |.:|||:||||:|||::|||:|||.||||||||.|:||||:..|:|||||
RBAM_032910__     51 VKSGPYQGKTLMELWDQHRELFGGTEGDRFPLLTKILDVKQHLSVKVHPD    100

BSNT_05457___    101 DYYAGENEEGELGKTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDW    150
                     ||.|.::..||.||:|||||||||||||||||||||||.|||||||||||
RBAM_032910__    101 DYDAEDHGLGETGKSECWYIIDCKENAEIIYGHTARSKAELVTMINSGDW    150

BSNT_05457___    151 EGLLRRIKIKPGDFYYVPSGTLHALCKGALVLETQQNSDATYRVYDYDRV    200
                     ||||||:||||||||||||||:||:|.|||||||||||:|.||:|||.|.
RBAM_032910__    151 EGLLRRVKIKPGDFYYVPSGTIHAICAGALVLETQQNSEAAYRIYDYGRT    200

BSNT_05457___    201 DDNGKPRELHFAKAVNAATVPHVDGYIDESTESRKGITIKTFVQGEYFSV    250
                     |.||:.||||...||||||||||||::|||||:|||:|||||||||||||
RBAM_032910__    201 DQNGQARELHIRDAVNAATVPHVDGFLDESTETRKGVTIKTFVQGEYFSV    250

BSNT_05457___    251 YKWDINGEAEMAQDESFLICSVIEGSGLLMYERETCPLKKGDHFIMPAQM    300
                     |:|||:|.|||.||..|::|||.||||.::.|.::..|:||.|||:|.||
RBAM_032910__    251 YQWDISGTAEMTQDAPFMLCSVTEGSGSIICEGKSAKLEKGAHFILPDQM    300

BSNT_05457___    301 PDFTIKGTCTLIVSHI    316
                     |||||.|.||:|||||
RBAM_032910__    301 PDFTINGDCTIIVSHI    316


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