Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05447 and RBAM_032830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:54
# Commandline: needle
# -asequence pep-align/BSNT_05447.1.9828.seq
# -bsequence pep-align/RBAM_032830___tagH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05447-RBAM_032830___tagH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05447-RBAM_032830___tagH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05447
# 2: RBAM_032830___tagH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 514
# Identity: 232/514 (45.1%)
# Similarity: 265/514 (51.6%)
# Gaps: 211/514 (41.1%)
# Score: 1201.0
#
#
#=======================================
BSNT_05447 1 MKLKVSFRNVSKQYQLYEKQSDKIKGLFFPNKD-KSFFAVRNVSFDVYEG 49
||||||||||||||.||:|||||||||||||:: |.||||||||||||||
RBAM_032830__ 1 MKLKVSFRNVSKQYFLYKKQSDKIKGLFFPNRNQKGFFAVRNVSFDVYEG 50
BSNT_05447 50 ETIGFVGINGSGKSTMSNLLAKIIPPTSGEIEMNGQPSLIAISAGLNNAL 99
|||||||||||||||||||||||||||||||:||||||||||||||||.|
RBAM_032830__ 51 ETIGFVGINGSGKSTMSNLLAKIIPPTSGEIDMNGQPSLIAISAGLNNQL 100
BSNT_05447 100 TGRDNIRLKCLMMGLTNKEIDEMYDSIVEFAEIGEFINQPVKSYSSGMKS 149
:|:||||||||||||.|::|||:|:.|||||:||:||:||||||||||||
RBAM_032830__ 101 SGKDNIRLKCLMMGLNNRQIDELYEKIVEFADIGDFIDQPVKSYSSGMKS 150
BSNT_05447 150 RLGFAISVHIDPDILIIDEALSVGDQTFYDKCVDRITEFKNQGKTIFFVS 199
|||||||.|:|||||||||||||||||||.||||||||||.:||||||||
RBAM_032830__ 151 RLGFAISAHMDPDILIIDEALSVGDQTFYQKCVDRITEFKERGKTIFFVS 200
BSNT_05447 200 HSIGQIEKICDRVAWIDNGELRMFDDTKTVVKEYKEFISWFKKLSIKEKD 249
||||||||:||||||:..||:||||:||.||||||.|:.||.|||.|||.
RBAM_032830__ 201 HSIGQIEKMCDRVAWMHYGEMRMFDETKAVVKEYKAFVDWFNKLSKKEKK 250
BSNT_05447 250 KYKKEQLASRKKVLSEEDLAHPEKEKKKQKSLANIIPIAGLSILLVLAAG 299
||:.||:..|.:...|:.::..:::|.|.|.:||.|.|..|::|.|.|..
RBAM_032830__ 251 KYQNEQIEGRTRAAEEQKISQAQQKKAKPKFIANTIQITLLALLAVGAGA 300
BSNT_05447 300 AMFV---------------------------------------------- 303
:||.
RBAM_032830__ 301 SMFSDKPLRAITSFGDVKQSDAGLYESVNKPALVKAEKADLYTEKDIKGK 350
BSNT_05447 303 -------------------------------------------------- 303
RBAM_032830__ 351 ASASVSFGTKVQVEAENNQAAKVKLNDKEYFMKKTDLYKVNALKKTDVQL 400
BSNT_05447 303 -------------------------------------------------- 303
RBAM_032830__ 401 NDFSGSLSSQTAEEFLSYLNKSRDDVQSKLKNPAAGQTADGRNVLKTSDA 450
BSNT_05447 303 -------------------------------------------------- 303
RBAM_032830__ 451 KTDVVIDKDTVSEVVFHLSRPADISALSEKGGSKINQNLLMLKNQEYTFS 500
BSNT_05447 303 -------------- 303
RBAM_032830__ 501 VNNADQTLTVTSKK 514
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