Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05447 and RBAM_032830
See
Amino acid alignment /
Visit
BSNT_05447 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:55
# Commandline: needle
# -asequence dna-align/BSNT_05447.1.9828.seq
# -bsequence dna-align/RBAM_032830___tagH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05447-RBAM_032830___tagH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05447-RBAM_032830___tagH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05447
# 2: RBAM_032830___tagH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1582
# Identity: 694/1582 (43.9%)
# Similarity: 694/1582 (43.9%)
# Gaps: 707/1582 (44.7%)
# Score: 2481.0
#
#
#=======================================
BSNT_05447 1 ATGAAACTAAAAGTTTCGTTTCGAAATGTTTCAAAACAGTATCAGCTTTA 50
||||||||||||||||||||..||||||||||||||||||||...||.||
RBAM_032830__ 1 ATGAAACTAAAAGTTTCGTTCAGAAATGTTTCAAAACAGTATTTTCTATA 50
BSNT_05447 51 TGAAAAACAATCGGATAAAATTAAAGGGCTGTTTTTTCCGAA---TAAGG 97
|.|||||||.||.||.|||||||||||.||||||||.||.|| .||..
RBAM_032830__ 51 TAAAAAACAGTCTGACAAAATTAAAGGACTGTTTTTCCCAAACAGAAATC 100
BSNT_05447 98 ATAAAAGTTTTTTTGCTGTTCGGAATGTCTCCTTTGACGTGTACGAAGGG 147
|.|||.|||||||.|||||.||.|||||.||.||||||||.||.||||||
RBAM_032830__ 101 AAAAAGGTTTTTTCGCTGTCCGAAATGTTTCTTTTGACGTCTATGAAGGG 150
BSNT_05447 148 GAGACGATCGGATTTGTGGGGATTAATGGATCGGGAAAATCGACGATGTC 197
||.|||||||||||.||.|||||.||.||.|||||||||||.||||||||
RBAM_032830__ 151 GAAACGATCGGATTCGTAGGGATCAACGGCTCGGGAAAATCAACGATGTC 200
BSNT_05447 198 CAACCTGCTGGCAAAAATCATTCCGCCGACAAGCGGTGAAATTGAAATGA 247
|||..||||.|||||.||||||||||||||||||||.||.|||||.||||
RBAM_032830__ 201 CAATTTGCTTGCAAAGATCATTCCGCCGACAAGCGGGGAGATTGATATGA 250
BSNT_05447 248 ACGGGCAACCTTCCCTGATTGCGATTTCCGCAGGATTAAACAATGCGCTG 297
|||||||.||.||..|.||.||||||||.||.|||||||||||| |..|.
RBAM_032830__ 251 ACGGGCAGCCGTCTTTAATCGCGATTTCTGCCGGATTAAACAAT-CAATT 299
BSNT_05447 298 ACG-GGCAGAGATAACATTCGTCTCAAGTGTTTAATGATGGGTCTCACAA 346
|.| ||.|.|||.|||||||||.|.||.||.||.|||||||||||||..|
RBAM_032830__ 300 AAGCGGTAAAGACAACATTCGTTTAAAATGCTTGATGATGGGTCTCAACA 349
BSNT_05447 347 ATAAAGAAATTGATGAGATGTATGACAGCATCGTTGAATTTGCTGAAATC 396
||....|.||.||.|||.|.|||||.|..|||||||||||.||.||.|||
RBAM_032830__ 350 ATCGGCAGATAGACGAGCTTTATGAAAAAATCGTTGAATTCGCGGATATC 399
BSNT_05447 397 GGCGAGTTTATCAATCAGCCGGTCAAAAGCTATTCCAGCGGAATGAAGTC 446
|||||.|||||..|||||||.||.|||||||||||.|||||.|||||.||
RBAM_032830__ 400 GGCGACTTTATAGATCAGCCTGTTAAAAGCTATTCAAGCGGGATGAAATC 449
BSNT_05447 447 CCGGCTTGGCTTTGCGATCTCAGTGCATATTGATCCCGATATTTTAATTA 496
|||.||.||.|||||.||.||.|.||||||.||.||.|||||..|.||||
RBAM_032830__ 450 CCGTCTCGGTTTTGCCATATCGGCGCATATGGACCCTGATATCCTTATTA 499
BSNT_05447 497 TTGACGAAGCGTTATCAGTAGGTGATCAAACCTTCTATGATAAATGTGTC 546
||||.||.|||.|.||||||||.||.||.||.||||||.|.||||||||.
RBAM_032830__ 500 TTGATGAGGCGCTCTCAGTAGGGGACCAGACTTTCTATCAGAAATGTGTG 549
BSNT_05447 547 GACAGAATTACCGAGTTTAAAAATCAAGGGAAAACCATTTTCTTTGTCAG 596
|||.|.|||||.|||||||||.|.|..||.|||||.||.||.||.|||||
RBAM_032830__ 550 GACCGCATTACGGAGTTTAAAGAACGCGGCAAAACGATCTTTTTCGTCAG 599
BSNT_05447 597 CCATTCAATTGGTCAAATCGAGAAAATTTGCGATCGGGTCGCCTGGATCG 646
.|||||.||.||.||.||.||||||||.||.||||||||.||.|||||..
RBAM_032830__ 600 TCATTCCATCGGACAGATTGAGAAAATGTGTGATCGGGTGGCTTGGATGC 649
BSNT_05447 647 ATAATGGCGAGCTTCGAATGTTTGATGATAC-AAAGACGGTCGTAAAGGA 695
||.|.|||||..|.||.|||||.||.||.|| |||| |.||.||.||.||
RBAM_032830__ 650 ATTACGGCGAAATGCGCATGTTCGACGAAACGAAAG-CCGTTGTGAAAGA 698
BSNT_05447 696 ATATAAAGAATTT----ATCAGCTGGTTTAAAAAGCTTTCCATAAAAGAG 741
||||||||..||| || |||||.||.||||||||.|..|||||
RBAM_032830__ 699 ATATAAAGCTTTTGTGGAT----TGGTTCAACAAGCTTTCAAAGAAAGA- 743
BSNT_05447 742 AAAG-ACAAATATAAAAAAGAGCA-ATTAGCAAGTCGCAAAA-------A 782
|||| |.||||||.||||.||||| ||| .||| |||.|| |
RBAM_032830__ 744 AAAGAAGAAATATCAAAACGAGCAGATT--GAAG--GCAGAACGCGGGCA 789
BSNT_05447 783 GGTTTTGTCCGA-----AGAAGATCTAGCTCA--TCCTGAAAAAGAAAAG 825
| |||| ||||.||| || ||| ..|.|.||||| ||||
RBAM_032830__ 790 G-------CCGAGGAACAGAAAATC-AG-TCAGGCGCAGCAAAAG-AAAG 829
BSNT_05447 826 AAAAAACAAAAATCTTTGGCAAATATCATTCCGATTGCAGGTTTATCCAT 875
..||..|.|||.||.|| ||.||||..||||.|||| |.
RBAM_032830__ 830 CGAAGCCCAAATTCATT-GCCAATACGATTCAGATT------------AC 866
BSNT_05447 876 CCTGCTCGTATTG---------GCCGCCGGAG---CGATGTTTGTTTAA- 912
.|||||.|.|||| |.|||.||.| |||||| |||.|
RBAM_032830__ 867 GCTGCTTGCATTGCTGGCTGTCGGCGCAGGCGCTTCGATGT---TTTCAG 913
BSNT_05447 912 -------------------------------------------------- 912
RBAM_032830__ 914 ACAAGCCTCTGCGTGCGATTACATCTTTCGGTGACGTCAAACAGAGCGAT 963
BSNT_05447 912 -------------------------------------------------- 912
RBAM_032830__ 964 GCCGGCCTTTATGAGTCTGTGAATAAACCTGCTTTGGTAAAAGCTGAAAA 1013
BSNT_05447 912 -------------------------------------------------- 912
RBAM_032830__ 1014 GGCGGACCTTTATACTGAAAAAGATATAAAAGGAAAAGCCTCCGCAAGTG 1063
BSNT_05447 912 -------------------------------------------------- 912
RBAM_032830__ 1064 TAAGTTTCGGCACGAAGGTGCAGGTAGAAGCCGAAAATAACCAGGCGGCC 1113
BSNT_05447 912 -------------------------------------------------- 912
RBAM_032830__ 1114 AAAGTGAAATTAAACGATAAAGAGTACTTTATGAAAAAGACTGATCTGTA 1163
BSNT_05447 912 -------------------------------------------------- 912
RBAM_032830__ 1164 TAAAGTGAACGCTTTAAAAAAGACGGATGTTCAGCTTAATGATTTCAGCG 1213
BSNT_05447 912 -------------------------------------------------- 912
RBAM_032830__ 1214 GCAGTTTATCAAGCCAAACAGCAGAAGAGTTTCTCTCATATCTCAATAAA 1263
BSNT_05447 912 -------------------------------------------------- 912
RBAM_032830__ 1264 AGCCGGGACGATGTGCAGAGTAAACTGAAAAATCCAGCTGCCGGACAAAC 1313
BSNT_05447 912 -------------------------------------------------- 912
RBAM_032830__ 1314 GGCTGACGGACGGAACGTATTAAAAACATCCGATGCAAAAACGGATGTAG 1363
BSNT_05447 912 -------------------------------------------------- 912
RBAM_032830__ 1364 TGATTGACAAGGATACAGTCTCCGAAGTGGTTTTTCATTTATCGCGTCCC 1413
BSNT_05447 912 -------------------------------------------------- 912
RBAM_032830__ 1414 GCAGACATCTCAGCTTTAAGTGAAAAAGGCGGCAGCAAAATCAATCAGAA 1463
BSNT_05447 912 -------------------------------------------------- 912
RBAM_032830__ 1464 TTTGCTCATGCTTAAAAACCAGGAATATACTTTTTCTGTGAACAATGCTG 1513
BSNT_05447 912 -------------------------------- 912
RBAM_032830__ 1514 ATCAAACACTGACCGTAACGTCTAAAAAGTAA 1545
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.