Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05427 and RBAM_032770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:54
# Commandline: needle
# -asequence pep-align/BSNT_05427___lytC.1.9828.seq
# -bsequence pep-align/RBAM_032770___lytC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05427___lytC-RBAM_032770___lytC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05427___lytC-RBAM_032770___lytC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05427___lytC
# 2: RBAM_032770___lytC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 497
# Identity: 225/497 (45.3%)
# Similarity: 316/497 (63.6%)
# Gaps: 12/497 ( 2.4%)
# Score: 1122.0
#
#
#=======================================
BSNT_05427___ 1 ---------MLLLGFFLFMPNVFAANSVTRLDGVNRYEVAVNVSKQGWSS 41
:.:||..||:|:..|.|:|.|:.|..||:.||..:||.|..
RBAM_032770__ 1 MKFIIKCLPVFILGVILFVPSALADNTVKRIGGSTRYDTAVLAAKQSWGE 50
BSNT_05427___ 42 ASTVIVANGKAYADVLSATPFAYRNNAPVLLTEASKLPTATKNRISQLKP 91
|.|||:..|.:|||.::|.|.:|:.|||:|.|...:|...||..:..||.
RBAM_032770__ 51 AKTVIITGGTSYADAIAAAPLSYQKNAPLLFTNKDQLSAGTKKGLIDLKT 100
BSNT_05427___ 92 SKVIVIGGTVSVQNGVVNEIKKLGVSSVERIGGANRYEVAANIANKLPKN 141
..||::|||.:|.....|:|.|||: ||:|:.|:.||..||.:|.::.::
RBAM_032770__ 101 KNVIIVGGTPAVSKNTENQIAKLGI-SVKRLSGSTRYATAAKVAGEMTRS 149
BSNT_05427___ 142 SKAVIANGTAYADSLAIGAYAARNGIPILLTSSNSIPTATKNAMKSKGTT 191
|.|::.||...||.:|..:||:....|||.|:.:::..:|.||:||.|..
RBAM_032770__ 150 STALVVNGFVDADGMAAISYASAKKYPILFTNDSTLNGSTSNAIKSLGIK 199
BSNT_05427___ 192 STIVVGGEVSISSSVYKQLASPTRIGGSNRYEVAANVVKKYYSSAKNAII 241
:|||:||..|||||:|.:|.:|:||.|.|||.::.|:.||...|.....:
RBAM_032770__ 200 NTIVIGGTSSISSSLYNKLPNPSRISGKNRYNLSVNLAKKTGLSTGYTFV 249
BSNT_05427___ 242 SNGYAYADGLTGSVLAAKQNRPMMFTNASSLPTPTREVIGSKNMTTFTVL 291
:||:..||.:.|.||:|||.|..:.||..||....|..|||||:|:|||:
RBAM_032770__ 250 TNGFKEADTIVGGVLSAKQGRVHLLTNGDSLSKDVRTYIGSKNITSFTVI 299
BSNT_05427___ 292 GGTVSLQSNVVSQLKNPIVGKKIFIDAGHGGTDSGAIGNSLYEKSVNLDV 341
|...||.:|..||||||:|||.:|||.|||..||||.||.|.||:||||:
RBAM_032770__ 300 GSASSLSNNAASQLKNPVVGKTVFIDPGHGYQDSGATGNGLLEKNVNLDI 349
BSNT_05427___ 342 AKLINTKLSNGGALPIMARTNDTYLTLAQRVSKAQSNKADLFVSIHAN-S 390
|..:|.:|...|||.:|:|..||:.:|.:||:|.....||:|:|:||| :
RBAM_032770__ 350 ATRLNNQLYGAGALTVMSRKGDTFDSLEERVNKGAKANADIFISVHANAN 399
BSNT_05427___ 391 ATPAASGTETYYYTTYESANSKRLATEIQNRLYVALNTTNRGVKIGNFHV 440
...:|:||||||..||:||||.|||..||.|:..||.|.:|.||...|:|
RBAM_032770__ 400 DNSSANGTETYYDKTYQSANSLRLAQNIQPRMVSALGTRDRSVKTAGFYV 449
BSNT_05427___ 441 IRESKMPSCLVELAFITNINDAAKLKSSIYKEKGAKAIYDGIVAYY- 486
|:.|||||.|:|..|:|:..||..||.|..|::.|..|..|:.:|:
RBAM_032770__ 450 IKYSKMPSVLLETGFVTSPIDANILKQSTKKDRLAAGITQGVSSYFR 496
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