Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05420 and RBAM_032740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:53
# Commandline: needle
# -asequence pep-align/BSNT_05420___tuaC.1.9828.seq
# -bsequence pep-align/RBAM_032740___tuaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05420___tuaC-RBAM_032740___tuaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05420___tuaC-RBAM_032740___tuaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05420___tuaC
# 2: RBAM_032740___tuaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 401
# Identity: 229/401 (57.1%)
# Similarity: 291/401 (72.6%)
# Gaps: 13/401 ( 3.2%)
# Score: 1178.0
#
#
#=======================================
BSNT_05420___ 1 MKVLWITSVYPSSQKPGEGVFHETQVQALYMQGVDVTVICPLPVNPAPLR 50
|||||:|||||||:|||||||||||.|.|...|.::|||||.|...||.|
RBAM_032740__ 1 MKVLWMTSVYPSSEKPGEGVFHETQAQELRKLGAEMTVICPRPKLAAPFR 50
BSNT_05420___ 51 LLKKKYRQTRTVPEYEERKGIPVYRPPYTALPGQLKWAQPHRRIAKSVLR 100
:|||.|||....|.:|.|||:.|:||.|.|:||||||||||:|:|:|:|.
RBAM_032740__ 51 VLKKTYRQKDIRPAHEWRKGVSVHRPFYQAVPGQLKWAQPHKRMAESILS 100
BSNT_05420___ 101 TIEKYSLAPNLIHAHFAMPSGGAAAVIAQRLKVPYVLTLHGSDVNIYPHY 150
.|:.:.|.|:|||||||||||||||::::.|.:||||||||||||:||||
RBAM_032740__ 101 EIKNHGLKPDLIHAHFAMPSGGAAAIVSKALGIPYVLTLHGSDVNVYPHY 150
BSNT_05420___ 151 SKGAFRAFDMAVHAAAKVLAVSDALKAKTKEMTGADCSVLPIGVNLDNFQ 200
||.|.|||..||..||.:.|||.:|:.:.|::..|:|:|||||:.||.|:
RBAM_032740__ 151 SKSAHRAFTFAVREAADIYAVSGSLREQMKKLIEAECTVLPIGITLDAFR 200
BSNT_05420___ 201 KNSASTLELREKLGLPTDKKLLTFVGRLVKGKGVAELAEAVRSLDDSYRA 250
|.:.:...:|::||||.||||:.|:|||||.|||.:|::||:|||:.|.|
RBAM_032740__ 201 KRNETKEAVRKRLGLPPDKKLIVFIGRLVKEKGVFDLSKAVQSLDERYEA 250
BSNT_05420___ 251 VFIGDGPEKQHIRQIAGEKAILMGQVSNLQISEYLAASDLFVLPSYSEGM 300
||:||||....:|:.| .|:.|||.|.::.:||.|||:..||||||||
RBAM_032740__ 251 VFVGDGPAASSLREAA---HIVTGQVPNDKVQDYLLASDVMALPSYSEGM 297
BSNT_05420___ 301 PTVVIEALALKVPVLCTAVGGVPSLFGKHEHLLIKPRSASSITEAVKGYL 350
||||||||||||||:||.|||:.||||||..|||||.|..::.|::..|.
RBAM_032740__ 298 PTVVIEALALKVPVICTDVGGLASLFGKHRGLLIKPGSPETLAESILQYD 347
BSNT_05420___ 351 EVGTWQEVIAEELYQTVLDDYDAFQNAGKLLDVYKDVVKNN--------- 391
|...|....||||||||...:||.|||..|.:.|:.|:...
RBAM_032740__ 348 EGEAWTPQTAEELYQTVRTYFDASQNAKTLKEKYRSVMNRAGQEENLSKE 397
BSNT_05420___ 391 - 391
RBAM_032740__ 398 G 398
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