Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05412 and RBAM_032700

See DNA alignment / Visit BSNT_05412 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:53
# Commandline: needle
#    -asequence pep-align/BSNT_05412___tuaG.1.9828.seq
#    -bsequence pep-align/RBAM_032700___tuaG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05412___tuaG-RBAM_032700___tuaG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05412___tuaG-RBAM_032700___tuaG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05412___tuaG
# 2: RBAM_032700___tuaG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     188/252 (74.6%)
# Similarity:   216/252 (85.7%)
# Gaps:           0/252 ( 0.0%)
# Score: 1000.0
# 
#
#=======================================

BSNT_05412___      1 MTRQKPLISVITPSYNAEEYIEKTIQSVLNQTFSDWEMIIADDCSTDGTR     50
                     ||..||.:|||||||||.||||.||||||:|:...|||||||||||||||
RBAM_032700__      1 MTNWKPFVSVITPSYNASEYIEDTIQSVLHQSHPHWEMIIADDCSTDGTR     50

BSNT_05412___     51 DILKRYEEDDDRIHAIFLKENQGAAAARNAALSKAEGHYVAFLDSDDVWK    100
                     |||::||:.|:||..::|::|.|||||||.||..|:|.|||||||||.||
RBAM_032700__     51 DILRQYEQKDERIRVVYLEKNGGAAAARNTALKHAKGRYVAFLDSDDRWK    100

BSNT_05412___    101 AEKLEKQLAFMRKHQHAFTFTAYELISQDGKPLHKTIHAPMSLTYDDVLK    150
                     .|||:||||||.:...||:||.|.::.|||.|..|||.||.||:||:.||
RBAM_032700__    101 KEKLQKQLAFMAERSCAFSFTGYSVMEQDGTPTDKTIQAPESLSYDEALK    150

BSNT_05412___    151 NTIIGCLTVMIDREQTGDIRMPNIRTRQDLATWLSVLKRGFKAYGLNEPL    200
                     |||||||||||||||||.|:||:||||||||||||:|||||.||||||.|
RBAM_032700__    151 NTIIGCLTVMIDREQTGQIQMPDIRTRQDLATWLSLLKRGFTAYGLNECL    200

BSNT_05412___    201 AEYRIVETSISSNKWKAAKKTWFVYREIERLHFMKATWCFVQYAKNAVKK    250
                     :|||:|:.|||||||||||||||||||||||||:||:|||:|||||||.|
RBAM_032700__    201 SEYRLVQNSISSNKWKAAKKTWFVYREIERLHFIKASWCFMQYAKNAVLK    250

BSNT_05412___    251 RL    252
                     ||
RBAM_032700__    251 RL    252


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