Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05397 and RBAM_032670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:52
# Commandline: needle
# -asequence pep-align/BSNT_05397___yvhJ.1.9828.seq
# -bsequence pep-align/RBAM_032670___yvhJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05397___yvhJ-RBAM_032670___yvhJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05397___yvhJ-RBAM_032670___yvhJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05397___yvhJ
# 2: RBAM_032670___yvhJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 407
# Identity: 217/407 (53.3%)
# Similarity: 269/407 (66.1%)
# Gaps: 78/407 (19.2%)
# Score: 1110.5
#
#
#=======================================
BSNT_05397___ 1 MPERVKVRV-KKKKNKRKIILKRILLLFFLFSIVFAGIIGYKVYKTLQAA 49
|.|||:||| ||||:|||||.||||||..|..:|.||..|||||||:.||
RBAM_032670__ 1 MAERVRVRVRKKKKSKRKIIFKRILLLLTLVLLVAAGFGGYKVYKTINAA 50
BSNT_05397___ 50 DSSYKELDRGEKSKLRKEVVDLKKKQPFSVLLLGVEDYATGGKGGRTDSI 99
|::|..|.||:|||||.:|:|:||| |||:|.:|:|:|||.|||||:||:
RBAM_032670__ 51 DNAYDALSRGDKSKLRDKVIDMKKK-PFSILFMGIENYATSGKGGRSDSL 99
BSNT_05397___ 100 IVATINPKQKTMKLLSIPRDTRVEISGDTSGTKTRINSAYGKGGAQTTVE 149
||.|::|:.||||:|||||||||.::|||:|.|::||:|:.||||..||.
RBAM_032670__ 100 IVVTLDPRNKTMKMLSIPRDTRVTLAGDTTGKKSKINAAFAKGGADETVS 149
BSNT_05397___ 150 TVEKLLNIPIDYYATVDFKGFKKTIDEVGGVDVEVPFDFNEKSDTSKSKK 199
|||.||.||||.|.||||.|||..|||||||:|:|||||:|.||.||.|:
RBAM_032670__ 150 TVEDLLGIPIDKYVTVDFNGFKDVIDEVGGVNVKVPFDFDEMSDVSKKKR 199
BSNT_05397___ 200 FYFQKGNMHLNGEEALAYARMRKQDPRGDFGRNDRQKQILMAMLDQVSKP 249
.||:|||||||||:|||||||||||.||||||||||||||.|::||:||.
RBAM_032670__ 200 IYFKKGNMHLNGEQALAYARMRKQDKRGDFGRNDRQKQILNALIDQMSKA 249
BSNT_05397___ 250 SNLAKIDTLADQVSDNITTNLRITQVLALQQIFSGFKGNDVETLTLKGSD 299
.|:||||.:|:..|:|:.||:|||:.||||||::||....::|||:.|||
RBAM_032670__ 250 GNIAKIDKIAETASNNVQTNIRITEGLALQQIYNGFTSKKIDTLTITGSD 299
BSNT_05397___ 300 LYI--------GNKYFFQPDDEELTKVQEELYNFL-YPDK---------- 330
||: |..|:||||...|.||::||...| ||..
RBAM_032670__ 300 LYLGGGGTASTGGTYYFQPDPTNLEKVRQELQKHLDYPSGSSTASDPASD 349
BSNT_05397___ 330 -------------------------------------------------- 330
RBAM_032670__ 350 STGTDSTTDSTSDSTGTGGTADSTSGSAGTSGTTDSTNGTAGANGTDSTQ 399
BSNT_05397___ 330 ------- 330
RBAM_032670__ 400 SGGTTGY 406
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