Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05389 and RBAM_032600

See DNA alignment / Visit BSNT_05389 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:51
# Commandline: needle
#    -asequence pep-align/BSNT_05389___comFC.1.9828.seq
#    -bsequence pep-align/RBAM_032600___comFC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05389___comFC-RBAM_032600___comFC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05389___comFC-RBAM_032600___comFC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05389___comFC
# 2: RBAM_032600___comFC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity:     133/240 (55.4%)
# Similarity:   162/240 (67.5%)
# Gaps:          15/240 ( 6.2%)
# Score: 691.0
# 
#
#=======================================

BSNT_05389___      1 MSNEAGGGIHKLICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKI     50
                                    :|||..|..:|||:||.|.|::::|..|.||.:||
RBAM_032600__      1 ---------------MCDSPISSSLTWRSLFSLAPEQEICSICSSKFEKI     35

BSNT_05389___     51 TGHICPLCGRPQSVHAVCRDCEVWRTRIRDSLLLRQNRSVYTYNDMMKET    100
                     .|.:|.:|||||..:..|.||....::.....|||||||||.|||.||::
RBAM_032600__     36 EGPVCSICGRPQESNEKCADCAARESKTEKRFLLRQNRSVYLYNDAMKDS     85

BSNT_05389___    101 LSRFKFRGDAEIINAFKSDFSSTFSKVYPDKHFVLVPIPLSKEREEERGF    150
                     |:||||||||:||.||:.||::.|...||.....|:|||||.||..||||
RBAM_032600__     86 LARFKFRGDAKIIQAFERDFAAGFKAAYPSNTHTLIPIPLSGERLAERGF    135

BSNT_05389___    151 NQAQLLAECLDRPSHHPLIRLNNEKQSKKKKTERLLSERIFDTKNNSAEG    200
                     ||::|||..|..|...|||||||||||||.||:||.:|:.|....|||.|
RBAM_032600__    136 NQSELLASLLGMPVISPLIRLNNEKQSKKSKTDRLSAEKKFSAAENSATG    185

BSNT_05389___    201 MNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS    240
                     ||:|||||:||||||||.||..||..|||:||||||||||
RBAM_032600__    186 MNVILIDDIYTTGATLHQAAEVLLTAGKASSVSSFTLIRS    225


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