Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05387 and RBAM_032580

See DNA alignment / Visit BSNT_05387 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:51
# Commandline: needle
#    -asequence pep-align/BSNT_05387___flgM.1.9828.seq
#    -bsequence pep-align/RBAM_032580___flgM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05387___flgM-RBAM_032580___flgM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05387___flgM-RBAM_032580___flgM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05387___flgM
# 2: RBAM_032580___flgM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 88
# Identity:      69/88 (78.4%)
# Similarity:    83/88 (94.3%)
# Gaps:           0/88 ( 0.0%)
# Score: 366.0
# 
#
#=======================================

BSNT_05387___      1 MKINQFGTQSVNPYQKNYDKQAVQKTAAQPQDKIEISSQAKEMQHASDAV     50
                     |||||:||||||||||||:||||||.||:|:||:||||.|||:|:|||||
RBAM_032580__      1 MKINQYGTQSVNPYQKNYEKQAVQKEAAKPKDKVEISSHAKELQNASDAV     50

BSNT_05387___     51 TGSRQEKIAQLKAQIENGSYKVDANHIAKNIINFYKKQ     88
                     |.:||||||||||.||:|:||:|:|.||:||:||||||
RBAM_032580__     51 TKTRQEKIAQLKADIESGTYKIDSNSIAENIVNFYKKQ     88


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