Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05387 and RBAM_032580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:51
# Commandline: needle
# -asequence dna-align/BSNT_05387___flgM.1.9828.seq
# -bsequence dna-align/RBAM_032580___flgM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05387___flgM-RBAM_032580___flgM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05387___flgM-RBAM_032580___flgM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05387___flgM
# 2: RBAM_032580___flgM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 268
# Identity: 212/268 (79.1%)
# Similarity: 212/268 (79.1%)
# Gaps: 2/268 ( 0.7%)
# Score: 824.0
#
#
#=======================================
BSNT_05387___ 1 ATGAAAATCAATCAATTTGGAACACAATCCGTTAATCCATATCAAAAAAA 50
||||||||||||||.|..|||||||||||||||||||||||.||||||||
RBAM_032580__ 1 ATGAAAATCAATCAGTACGGAACACAATCCGTTAATCCATACCAAAAAAA 50
BSNT_05387___ 51 TTATGATAAGCAAGCGGTGCAAAAAACTGCTGCACAGCCTCAAGATAAAA 100
|||.||.||||||||.||.||||||...||||||.||||..|.||.|||.
RBAM_032580__ 51 TTACGAAAAGCAAGCCGTACAAAAAGAGGCTGCAAAGCCGAAGGACAAAG 100
BSNT_05387___ 101 TTGAAATTTCATCACAGGCTAAAGAAATGCAACATGCATCCGACGCAGTC 150
|.||||||||.||.||.||.|||||..|.|||.||||.||.||.||.|||
RBAM_032580__ 101 TGGAAATTTCTTCTCATGCAAAAGAGCTTCAAAATGCGTCAGATGCGGTC 150
BSNT_05387___ 151 ACTGGTTCACGACAGGAAAAAATTGCGCAGCTTAAAGCGCAAATTGAAAA 200
|||....||||||||||||||||.||.||||||||||||.|.||.||.|.
RBAM_032580__ 151 ACTAAAACACGACAGGAAAAAATCGCTCAGCTTAAAGCGGATATAGAGAG 200
BSNT_05387___ 201 CGGGTCATACAAAGTAGACGCAAATCA-TATCGCGAAAAATATAATTAAT 249
|||..||||.|||.||||..|||| || .|||||..||||.|||.|.|||
RBAM_032580__ 201 CGGAACATATAAAATAGATTCAAA-CAGCATCGCTGAAAACATAGTAAAT 249
BSNT_05387___ 250 TTTTATAAAAAGCAATAA 267
||.|||||||||||||||
RBAM_032580__ 250 TTCTATAAAAAGCAATAA 267
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