Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05386 and RBAM_032570

See DNA alignment / Visit BSNT_05386 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:51
# Commandline: needle
#    -asequence pep-align/BSNT_05386___yvyG.1.9828.seq
#    -bsequence pep-align/RBAM_032570___yvyG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05386___yvyG-RBAM_032570___yvyG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05386___yvyG-RBAM_032570___yvyG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05386___yvyG
# 2: RBAM_032570___yvyG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 161
# Identity:     113/161 (70.2%)
# Similarity:   133/161 (82.6%)
# Gaps:           2/161 ( 1.2%)
# Score: 536.0
# 
#
#=======================================

BSNT_05386___      1 MSAKAIIEQLKRLCVLHEHLLTLSEEKTEALKAGKTKELSNILTKEQKYI     50
                     ||||.||:||||||.|||||||||||||||||||||||||||||||||||
RBAM_032570__      1 MSAKPIIDQLKRLCALHEHLLTLSEEKTEALKAGKTKELSNILTKEQKYI     50

BSNT_05386___     51 QAITQTEDDRIKTTSAFLGYSENNTISACIAKTSGSEKEELEQLYESLSQ    100
                     |||.|||::||:.||.||...|:|||:|||::||||||:|||.|:.|||.
RBAM_032570__     51 QAIGQTEEERIRLTSQFLSRGEDNTIAACISRTSGSEKQELEGLFHSLSA    100

BSNT_05386___    101 VLGRLKKVNEMNRQLTRDALQFISISYDMLVPKE-NNFNYSKSIKAELPK    149
                     :|.|||:|||||:|||..||||||.::||::|.| .|.||.:...|..| 
RBAM_032570__    101 LLDRLKEVNEMNKQLTIQALQFISGAFDMIMPGEKENMNYKEPQAARKP-    149

BSNT_05386___    150 SSQMKLFDSKA    160
                     .|::.||||||
RBAM_032570__    150 VSRLTLFDSKA    160


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