Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05386 and RBAM_032570

See Amino acid alignment / Visit BSNT_05386 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:51
# Commandline: needle
#    -asequence dna-align/BSNT_05386___yvyG.1.9828.seq
#    -bsequence dna-align/RBAM_032570___yvyG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05386___yvyG-RBAM_032570___yvyG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05386___yvyG-RBAM_032570___yvyG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05386___yvyG
# 2: RBAM_032570___yvyG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 513
# Identity:     357/513 (69.6%)
# Similarity:   357/513 (69.6%)
# Gaps:          60/513 (11.7%)
# Score: 1247.5
# 
#
#=======================================

BSNT_05386___      1 ATGTCAGCGAAGGCAATTATTGAACAATTGAAGCGACTTTGCGTTCTGCA     50
                     ||||||||.|||.||||||||||.|||.|||||||||||||||..|||||
RBAM_032570__      1 ATGTCAGCAAAGCCAATTATTGATCAACTGAAGCGACTTTGCGCACTGCA     50

BSNT_05386___     51 TGAGCACCTGCTCACGCTGTCTGAAGAAAAGACGGAAGCGCTCAAAGCCG    100
                     |||.||.|||||||||||||||||.||.||.|||||||||||.|||||.|
RBAM_032570__     51 TGAACATCTGCTCACGCTGTCTGAGGAGAAAACGGAAGCGCTGAAAGCAG    100

BSNT_05386___    101 GCAAAACAAAAGAGCTTTCTAACATTTTGACAAAAGAGCAAAAATATATT    150
                     |.||||||||||||||.||.|||||.|||||.|||||||||||.||||||
RBAM_032570__    101 GTAAAACAAAAGAGCTCTCCAACATATTGACCAAAGAGCAAAAGTATATT    150

BSNT_05386___    151 CAAGCAATCACGCAGACAGAAGATGACCGGATCAAAACAACTTCGGCCTT    200
                     ||.||||||..||||||.||.||.||.||.||||....||||||....||
RBAM_032570__    151 CAGGCAATCGGGCAGACTGAGGAAGAGCGAATCAGGTTAACTTCTCAGTT    200

BSNT_05386___    201 TCTCGGATATAGC------GAAAATAATACTATATCCGCATGTATCGCCA    244
                     ||||      |||      ||..|.|||||.||..|.|||||.|||.|||
RBAM_032570__    201 TCTC------AGCCGCGGTGAGGACAATACAATTGCTGCATGCATCTCCA    244

BSNT_05386___    245 AAACCTCAGGCAGTGAAAAGGAAGAGCTGGAACAACTATACGAATCTCTT    294
                     .|||.||||||||||||||..|.|||||.|||....|||...|.|||.|.
RBAM_032570__    245 GAACTTCAGGCAGTGAAAAACAGGAGCTTGAAGGGTTATTTCACTCTTTG    294

BSNT_05386___    295 TCTCAAGTTCTCGGACGTCTGAAAAAAGTAAATGAGATGAATAGGCAGCT    344
                     |||....||||.|..|||||||||.||||.|||||||||||.|..|||||
RBAM_032570__    295 TCTGCGCTTCTTGACCGTCTGAAAGAAGTGAATGAGATGAACAAACAGCT    344

BSNT_05386___    345 GACAAGAGACGCGCTGCAATTCATCTC-----TATTTCG-TACGAT-ATG    387
                     .||.|...|.||..|.|||||||||||     .| |||| ||.||| |||
RBAM_032570__    345 CACGATTCAGGCTTTACAATTCATCTCGGGGGCA-TTCGATATGATCATG    393

BSNT_05386___    388 CTGGTTCCTAAGGAAA---ATAACTTCAATTACAGCAAATCAATTAAAGC    434
                     |.||.|      ||||   |.|||.|.|||||            ||||  
RBAM_032570__    394 CCGGGT------GAAAAAGAGAACATGAATTA------------TAAA--    423

BSNT_05386___    435 TGAGCTGCCGAA---------AAG-----CAGCCAAATGAAACTGTTTGA    470
                      ||||.||  ||         |||     |||||...|||.|.|.||.||
RBAM_032570__    424 -GAGCCGC--AAGCGGCGCGCAAGCCTGTCAGCCGTTTGACATTATTCGA    470

BSNT_05386___    471 TTCAAAAGCTTAG    483
                     |||||||||||||
RBAM_032570__    471 TTCAAAAGCTTAG    483


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