Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05384 and RBAM_032550

See DNA alignment / Visit BSNT_05384 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:51
# Commandline: needle
#    -asequence pep-align/BSNT_05384___flgL.1.9828.seq
#    -bsequence pep-align/RBAM_032550___flgL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05384___flgL-RBAM_032550___flgL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05384___flgL-RBAM_032550___flgL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05384___flgL
# 2: RBAM_032550___flgL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     190/305 (62.3%)
# Similarity:   247/305 (81.0%)
# Gaps:           7/305 ( 2.3%)
# Score: 999.5
# 
#
#=======================================

BSNT_05384___      1 MRVTQGMIQQNSLRYIGSSYSKLDKLQSQISSGKKISKASDDPVVAMKSL     50
                     ||||||||.:||||:|||||.|||:||.|:|:||||:|||||||||||.:
RBAM_032550__      1 MRVTQGMIAKNSLRFIGSSYDKLDRLQQQVSTGKKITKASDDPVVAMKGM     50

BSNT_05384___     51 KYNTQLSQVQQYKSNASQAFTWLENTETNITEGIDILSKVRELAVEAQND    100
                     :|.|||:||.||:.|.||.||||||:|:::....||:.|:|:|.|:|::|
RBAM_032550__     51 QYRTQLAQVNQYQRNVSQGFTWLENSESSVNSETDIMGKIRDLMVQAKSD    100

BSNT_05384___    101 TNGEAERQAIGVEVKQLKEQLLNIANTQVNGRYIFNGTNSDKPPVTDNGD    150
                     :|||.|.:|||.|:.|||:||:::|||||||||:|||||||.||:|:|.|
RBAM_032550__    101 SNGETELKAIGTEIGQLKKQLVSVANTQVNGRYLFNGTNSDVPPITENAD    150

BSNT_05384___    151 GTYT-----ISDTADVVVNISNNMSLKVNSDPKSAFGGTSESGQNVFEML    195
                     ||||     .:..:||.:||||...|||||||.|||||.:::|.||||.|
RBAM_032550__    151 GTYTYNYENYTGASDVNINISNGAVLKVNSDPNSAFGGVAQNGDNVFEFL    200

BSNT_05384___    196 DSFEKALNSGSLD--GMDNVLDDIDHFSDGMSAERSDLGARYNRLELVNT    243
                     :|.|.:|:.|:|.  ..|.||.|||.|:|.|:||:|::|||.|||||:.|
RBAM_032550__    201 NSLEASLSKGTLSEADSDQVLSDIDGFTDKMNAEKSNIGARTNRLELIQT    250

BSNT_05384___    244 RLSAQEETATKVLSDNEDVELEEVITEFIAQQSVHRATLAVNAQIVQPTL    293
                     ||.:|..||.||||||||||:|:||.::::||:||||.|:|||.|:||:|
RBAM_032550__    251 RLESQAATAEKVLSDNEDVEMEDVIVDYLSQQTVHRAALSVNANIIQPSL    300

BSNT_05384___    294 IDFLK    298
                     |||||
RBAM_032550__    301 IDFLK    305


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