Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05381 and RBAM_032520

See DNA alignment / Visit BSNT_05381 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:51
# Commandline: needle
#    -asequence pep-align/BSNT_05381___csrA.1.9828.seq
#    -bsequence pep-align/RBAM_032520___csrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05381___csrA-RBAM_032520___csrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05381___csrA-RBAM_032520___csrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05381___csrA
# 2: RBAM_032520___csrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 74
# Identity:      54/74 (73.0%)
# Similarity:    68/74 (91.9%)
# Gaps:           0/74 ( 0.0%)
# Score: 287.0
# 
#
#=======================================

BSNT_05381___      1 MLVLSRKINEAIQIGADIEVKVIAVEGDQVKLGIDAPKHIDIHRKEIYLT     50
                     |||||||:||:||||.|||:||||:||:||||||:||:|:|||||||||:
RBAM_032520__      1 MLVLSRKVNESIQIGPDIEIKVIAIEGEQVKLGIEAPQHVDIHRKEIYLS     50

BSNT_05381___     51 IQEENNRAAALSSDVISTLSSQKK     74
                     |.||||||.:.::|::..||||||
RBAM_032520__     51 ILEENNRAVSFNTDLLLNLSSQKK     74


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