Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05377 and RBAM_032500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:50
# Commandline: needle
# -asequence pep-align/BSNT_05377___fliD.1.9828.seq
# -bsequence pep-align/RBAM_032500___fliD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05377___fliD-RBAM_032500___fliD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05377___fliD-RBAM_032500___fliD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05377___fliD
# 2: RBAM_032500___fliD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 518
# Identity: 254/518 (49.0%)
# Similarity: 352/518 (68.0%)
# Gaps: 23/518 ( 4.4%)
# Score: 1246.0
#
#
#=======================================
BSNT_05377___ 1 MVTRITGLASGMDIDDIVSKLMQTERAPLDKLKQKKQTLEWQRDSYREVN 50
||||||||.||:|:|.:|.|:|..|:.||:||.|:||||||:||:|||||
RBAM_032500__ 1 MVTRITGLNSGLDVDSLVKKMMDAEKQPLNKLNQQKQTLEWKRDAYREVN 50
BSNT_05377___ 51 TKIKELQDYMSKNTLTYPSTYQSKTVTSSNESVLTATGSASAPNSSSTVE 100
|:|.::.. .:.|.:...:.:..||||||:.|| :|...::..|.|:::.
RBAM_032500__ 51 TQIADMYS-TTFNNMLMSTNWNKKTVTSSDSSV-SAVAVSAEQNISTSMS 98
BSNT_05377___ 101 VASLATAATYKANNYTGYTQG-DYNLAFNVVAPGETTAKTVNISVTSADT 149
|..|||:.|||::....:|.| ...|.|||..||||....||:::.:.||
RBAM_032500__ 99 VQQLATSTTYKSSGAINFTSGQSQTLKFNVTNPGETKPTEVNVTIAATDT 148
BSNT_05377___ 150 IDNVISKLNSSDLGVSAFKDKIWNGTEYVETIAFSSKATGAGGSIQAADS 199
||:||||||||.|||:|.|:||.|||:||:||||:|..||.|.::.|.|.
RBAM_032500__ 149 IDDVISKLNSSGLGVTALKEKISNGTDYVDTIAFTSNKTGEGFTLSAGDD 198
BSNT_05377___ 200 ATADFMSGQLGFSL-DADNKLTAYKEGTNAKVTINGFEMEKLTNNFTVNG 248
||..|:..||||:: ||.|:|||..||.|||.|.||.||.|.:||||:||
RBAM_032500__ 199 ATKSFLKDQLGFAVDDATNELTANAEGKNAKFTFNGLEMTKTSNNFTING 248
BSNT_05377___ 249 VTYSIKNTTAATGPVTTSVSTDVDGIYNQIKEFVDKYNEMVDSLNEKLKE 298
:.|::.:.|.:...||.:.:||.|||::.||:||||||.::.|.|||:.|
RBAM_032500__ 249 IKYTLNSVTDSNKTVTINSTTDTDGIFDNIKDFVDKYNTLIKSANEKVTE 298
BSNT_05377___ 299 EKYRDYTPLTSEQKEAMSDKEVELWEEKAKSGLLRNDSSISTGTNQMRTD 348
.|||||.|||.||:|||:||::|.||.||||||||:||::..|..:||.|
RBAM_032500__ 299 SKYRDYKPLTDEQREAMTDKQIEQWEAKAKSGLLRSDSTLQNGLAEMRLD 348
BSNT_05377___ 349 FYTQVNADGKTYQLTEFGITTSSAYQMR---GHLEI-NEDKLKAKIQEDP 394
.|:.|..|||.|||.:|||.||| |:.: |.|.| :|.|||.||.|:|
RBAM_032500__ 349 LYSTVTIDGKKYQLADFGIETSS-YEDQGKFGKLVIKDEAKLKQKITENP 397
BSNT_05377___ 395 QSVAALFTSGSNSSAY-----------SDKGIMKRIGDTLKSTVKSIEAK 433
..||.||.:.|.|:.. .::||.:|:.|||......|..:
RBAM_032500__ 398 SLVAKLFNADSTSTITDSSTGKTIKNPEEQGIARRLKDTLNKMQTQISKQ 447
BSNT_05377___ 434 AGNSTMGTNDYSIGKNLNTISTDITKMQDRLTTIENRYYSKFSAMDSAIQ 483
||..:..::.::|||:||.|.|:|:.|:.:|..||:|||.||||:|:|::
RBAM_032500__ 448 AGTESSVSSSFAIGKSLNEIETNISNMKTKLDDIESRYYKKFSALDTALE 497
BSNT_05377___ 484 KMNEQASYLSQLLVQ--- 498
|:|.|:|||:.:|..
RBAM_032500__ 498 KLNSQSSYLTSMLGSSTS 515
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