Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05374 and RBAM_032480

See DNA alignment / Visit BSNT_05374 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:50
# Commandline: needle
#    -asequence pep-align/BSNT_05374___fliT.1.9828.seq
#    -bsequence pep-align/RBAM_032480___fliT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05374___fliT-RBAM_032480___fliT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05374___fliT-RBAM_032480___fliT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05374___fliT
# 2: RBAM_032480___fliT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:      50/114 (43.9%)
# Similarity:    75/114 (65.8%)
# Gaps:           1/114 ( 0.9%)
# Score: 267.0
# 
#
#=======================================

BSNT_05374___      1 MN-NIDQLYTETKSMLSHIQNTPESDELLKQIEDFVAKRSELIQEISLPL     49
                     || |:..||.|||:|.:.:::.||||:|:..:..|..||.|::..|..|.
RBAM_032480__      1 MNSNVFSLYNETKNMYAALKDAPESDDLISSVTAFTEKREEMLAGIKPPF     50

BSNT_05374___     50 SEEERKQMKLVLTWDQLIVKEMERLKQSIAAELQQMKRKRVMHTTYLNPY     99
                     ||||:..::.|...|:||..|::|::..|..|::.:|:||:.|.||.|||
RBAM_032480__     51 SEEEKTLLQQVAAMDRLITGEVKRIQDGIRNEIKTLKKKRIYHNTYFNPY    100

BSNT_05374___    100 NNITIDGTYYDKRK    113
                     :..|.||.||||||
RBAM_032480__    101 HQTTSDGRYYDKRK    114


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