Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05373 and RBAM_032470

See DNA alignment / Visit BSNT_05373 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:50
# Commandline: needle
#    -asequence pep-align/BSNT_05373.1.9828.seq
#    -bsequence pep-align/RBAM_032470.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05373-RBAM_032470.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05373-RBAM_032470.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05373
# 2: RBAM_032470
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity:      66/125 (52.8%)
# Similarity:    95/125 (76.0%)
# Gaps:           0/125 ( 0.0%)
# Score: 385.0
# 
#
#=======================================

BSNT_05373         1 MKSIEDYTLLSAYYHLLFTIEEGLCYLIEAEENLSKTEGDRIYQDLIQAF     50
                     |:|:.||.|:||||.|||||:||||||::.:::..||||:|||.||||||
RBAM_032470        1 MRSLNDYHLVSAYYQLLFTIDEGLCYLLDTQDDFFKTEGERIYNDLIQAF     50

BSNT_05373        51 FYLDSTHSTLLFIMDSRCAEICVKAFDQIFAEFDQLVSFSFPSHEFCEYL    100
                     |:|||:|:.||.|::.||.|..:::||:||.:|..|..:.|||..|.|:|
RBAM_032470       51 FHLDSSHALLLSIIECRCVETAIRSFDEIFQDFSMLNDYDFPSAPFQEFL    100

BSNT_05373       101 KEHFLIHYRKWMLSIHQCMEPFLIN    125
                     |..||.||:.||...|.|::|::::
RBAM_032470      101 KTIFLPHYKLWMEQTHDCIKPYVLH    125


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