Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05373 and RBAM_032470
See
Amino acid alignment /
Visit
BSNT_05373 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:50
# Commandline: needle
# -asequence dna-align/BSNT_05373.1.9828.seq
# -bsequence dna-align/RBAM_032470.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05373-RBAM_032470.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05373-RBAM_032470.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05373
# 2: RBAM_032470
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 437
# Identity: 244/437 (55.8%)
# Similarity: 244/437 (55.8%)
# Gaps: 118/437 (27.0%)
# Score: 623.5
#
#
#=======================================
BSNT_05373 1 TTGAAGAGCATTGAA-GATTATACGCTTT--TATCAGCTTATTATCATCT 47
||| |||...||||| ||| |||..||| |.|||||.|||||.||.||
RBAM_032470 1 TTG-AGAAGTTTGAACGAT--TACCATTTGGTGTCAGCCTATTACCAGCT 47
BSNT_05373 48 TCTTTTTACCATTGAAGAAGGGTTGTGTTATTTGATAGAGGCTGAAGAGA 97
|||||||||.|||||.||.|||.|.||.||..||.|.||..|..|.||..
RBAM_032470 48 TCTTTTTACGATTGATGAGGGGCTTTGCTACCTGTTGGACACGCAGGATG 97
BSNT_05373 98 ATTTATCAAAAACAGAAGGGGATCGGATCTACCAAGATCTGATCCAAGCC 147
||||.|..||.||.||.||.||.|||||.|||.|.|||.||||.||.||.
RBAM_032470 98 ATTTTTTTAAGACGGAGGGCGAGCGGATTTACAACGATTTGATTCAGGCT 147
BSNT_05373 148 TTTTTTTATTTGGATTCAACACATTCAACACTTC-----TCT-TCATTAT 191
||||||.||.|.|||||..|.||| .|.|||| ||| |||||
RBAM_032470 148 TTTTTTCATCTCGATTCCTCTCAT---GCGCTTCTGCTGTCTATCATT-- 192
BSNT_05373 192 GGATTCGCGGTGTGCTGAAATTTGTGTGAAAG-------------CATTT 228
|.||||.|| ||.||| .|| |||||
RBAM_032470 193 ---------GAGTGCCGA----TGCGTG-GAGACGGCGATCCGCTCATTT 228
BSNT_05373 229 GACCAAATTTTTGCGGAGTT-----TGATCAATTGGTCTCTTTCTCTTTT 273
|||.|.||.|||..|||.|| ||.|.|| |..||.|..|||
RBAM_032470 229 GACGAGATCTTTCAGGATTTCAGCATGTTAAA------TGATTATGATTT 272
BSNT_05373 274 CCC----------TCTCATGAGTTCTGTGAGTATTTAAAGGAA-CAT-TT 311
||| |.|||.||||| |||||| || ||| ||
RBAM_032470 273 CCCGTCCGCCCCTTTTCAGGAGTT---------TTTAAA--AACCATCTT 311
BSNT_05373 312 TCTGATTCATTATAGAAAA----TGGATG--------------CTGTCTA 343
||||...|||||| || |||||| |||
RBAM_032470 312 TCTGCCGCATTAT----AAGCTGTGGATGGAGCAGACGCACGACTG---- 353
BSNT_05373 344 TTCATCAA--TGTATGGAACCCTTTTTAATCAATTAG 378
|||||| .||||| ||.|| .|.|||
RBAM_032470 354 --CATCAAACCGTATG------TTCTT----CACTAG 378
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.