Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05372 and RBAM_032460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:50
# Commandline: needle
# -asequence pep-align/BSNT_05372___yvyD.1.9828.seq
# -bsequence pep-align/RBAM_032460___yvyD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05372___yvyD-RBAM_032460___yvyD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05372___yvyD-RBAM_032460___yvyD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05372___yvyD
# 2: RBAM_032460___yvyD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity: 169/189 (89.4%)
# Similarity: 179/189 (94.7%)
# Gaps: 1/189 ( 0.5%)
# Score: 871.0
#
#
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BSNT_05372___ 1 MNYNIRGENIEVTPALKDHVERKIGKLERYFDHSVDADVNVNLKFYNDKE 50
|||||||||||||||||||||||||||||||:.||:||||||||||||||
RBAM_032460__ 1 MNYNIRGENIEVTPALKDHVERKIGKLERYFEQSVNADVNVNLKFYNDKE 50
BSNT_05372___ 51 SKVEVTIPMTDLALRSEVHNEDMYNAIDLATNKLERQIRKHKTKVNRKFR 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032460__ 51 SKVEVTIPMTDLALRSEVHNEDMYNAIDLATNKLERQIRKHKTKVNRKFR 100
BSNT_05372___ 101 EQGSPKYLLANGLGSDTDIAVQDDIEEEESLDIVRQKRFNLKPMDSEEAI 150
|||.||:...||..:||.:||||:| |::|.:|||||||||||||:||||
RBAM_032460__ 101 EQGLPKHYFENGSAADTGVAVQDEI-EDDSPEIVRQKRFNLKPMDNEEAI 149
BSNT_05372___ 151 LQMNMLGHNFFVFTNAETNLTNVVYRRNDGKYGLIEPTE 189
|||||||||||||||||||||||||||||||||||||||
RBAM_032460__ 150 LQMNMLGHNFFVFTNAETNLTNVVYRRNDGKYGLIEPTE 188
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