Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05372 and RBAM_032460

See Amino acid alignment / Visit BSNT_05372 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:50
# Commandline: needle
#    -asequence dna-align/BSNT_05372___yvyD.1.9828.seq
#    -bsequence dna-align/RBAM_032460___yvyD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05372___yvyD-RBAM_032460___yvyD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05372___yvyD-RBAM_032460___yvyD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05372___yvyD
# 2: RBAM_032460___yvyD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 572
# Identity:     481/572 (84.1%)
# Similarity:   481/572 (84.1%)
# Gaps:           7/572 ( 1.2%)
# Score: 2018.0
# 
#
#=======================================

BSNT_05372___      1 ATGAACTATAACATCAGAGGAGAAAATATTGAAGTGACACCCGCGTTAAA     50
                     ||||||||.||.||||||||||||||.|||||.||.|||||.||||||||
RBAM_032460__      1 ATGAACTACAATATCAGAGGAGAAAACATTGAGGTTACACCTGCGTTAAA     50

BSNT_05372___     51 GGATCATGTCGAGAGGAAGATCGGCAAGCTGGAGCGCTATTTTGACCATA    100
                     |||||||||.|||||.||.|||||||||||||||||.|||||.||.||.|
RBAM_032460__     51 GGATCATGTGGAGAGAAAAATCGGCAAGCTGGAGCGATATTTCGAGCAGA    100

BSNT_05372___    101 GCGTGGATGCTGATGTGAACGTCAACTTGAAGTTTTACAATGACAAGGAG    150
                     ||||..||||.|||||||||||||||||.||.||.||.|||||.|||||.
RBAM_032460__    101 GCGTCAATGCCGATGTGAACGTCAACTTAAAATTCTATAATGATAAGGAA    150

BSNT_05372___    151 TCTAAGGTTGAGGTTACGATTCCGATGACAGATCTGGCGCTTCGGTCCGA    200
                     ||.||.|||||.||.||.|||||||||||.||||||||||||||.||.||
RBAM_032460__    151 TCCAAAGTTGAAGTCACCATTCCGATGACTGATCTGGCGCTTCGTTCTGA    200

BSNT_05372___    201 GGTGCATAACGAGGATATGTACAACGCAATTGATCTCGCAACAAACAAAC    250
                     .|||||||||||||||||||||||.|||||||||||||||||||||||.|
RBAM_032460__    201 AGTGCATAACGAGGATATGTACAATGCAATTGATCTCGCAACAAACAAGC    250

BSNT_05372___    251 TGGAACGTCAAATCCGTAAGCATAAAACGAAAGTAAACCGTAAATTCCGT    300
                     ||||||||||||||||.|||||.|||||.|||||.|||||.||||||||.
RBAM_032460__    251 TGGAACGTCAAATCCGAAAGCACAAAACAAAAGTCAACCGAAAATTCCGC    300

BSNT_05372___    301 GAGCAGGGCTC-TCCAAAATATTTATTGGCAAACGGTCTTGGCT-CTGAT    348
                     |||||||| || |||.|||.|||..||.|..||||| |...||| |||||
RBAM_032460__    301 GAGCAGGG-TCTTCCGAAACATTATTTCGAGAACGG-CAGCGCTGCTGAT    348

BSNT_05372___    349 ACAGATATTGCGGTTCAGGATGACATAGAAGAGGAGGAGAGCTTGGATAT    398
                     ||.|...|.|||||||||||.||.||.|||   ||.||.|||..|||.||
RBAM_032460__    349 ACGGGCGTAGCGGTTCAGGACGAAATTGAA---GATGACAGCCCGGAAAT    395

BSNT_05372___    399 CGTCCGTCAGAAACGCTTTAATTTAAAGCCGATGGATAGTGAAGAAGCGA    448
                     .||||||||.||.||.|||||||||||.||||||||||.|||||||||||
RBAM_032460__    396 TGTCCGTCAAAAGCGTTTTAATTTAAAACCGATGGATAATGAAGAAGCGA    445

BSNT_05372___    449 TCCTGCAAATGAATATGCTCGGCCATAATTTCTTTGTTTTCACAAATGCG    498
                     |.||.|||||||||||||||||.|||||||||||.||.|||||.||.|||
RBAM_032460__    446 TTCTCCAAATGAATATGCTCGGACATAATTTCTTCGTATTCACCAACGCG    495

BSNT_05372___    499 GAAACAAACCTTACAAATGTCGTGTACCGCAGAAATGACGGGAAATATGG    548
                     ||.||.||.||.|||||.|||||.|||||||||||||||||.|||||.||
RBAM_032460__    496 GAGACGAATCTCACAAACGTCGTTTACCGCAGAAATGACGGCAAATACGG    545

BSNT_05372___    549 CTTAATTGAACCGACTGAATAA    570
                     .|||||||||||||||||||||
RBAM_032460__    546 ATTAATTGAACCGACTGAATAA    567


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