Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05370 and RBAM_032450

See DNA alignment / Visit BSNT_05370 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:50
# Commandline: needle
#    -asequence pep-align/BSNT_05370___secA.1.9828.seq
#    -bsequence pep-align/RBAM_032450___secA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05370___secA-RBAM_032450___secA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05370___secA-RBAM_032450___secA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05370___secA
# 2: RBAM_032450___secA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 841
# Identity:     797/841 (94.8%)
# Similarity:   826/841 (98.2%)
# Gaps:           0/841 ( 0.0%)
# Score: 4111.0
# 
#
#=======================================

BSNT_05370___      1 MLGILNKMFDPTKRTLNRYEKIANDIDAIRGDYENLSDDALKHKTIEFKE     50
                     ||||||||||||||.||:||||||||||:|||||||||:||||||.||||
RBAM_032450__      1 MLGILNKMFDPTKRALNKYEKIANDIDAVRGDYENLSDEALKHKTAEFKE     50

BSNT_05370___     51 RLEKGATTDDLLVEAFAVVREASRRVTGMFPFKVQLMGGVALHDGNIAEM    100
                     |||||.|||||||||||||||||||||||||||||||||:|||:|||:||
RBAM_032450__     51 RLEKGETTDDLLVEAFAVVREASRRVTGMFPFKVQLMGGIALHEGNISEM    100

BSNT_05370___    101 KTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQMGKIFEFLGL    150
                     ||||||||||||||||||||||||||||||||||||||:|||:||.||||
RBAM_032450__    101 KTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAQQMGEIFAFLGL    150

BSNT_05370___    151 TVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQRP    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032450__    151 TVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQRP    200

BSNT_05370___    201 LHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDY    250
                     |||||||||||||:|||||||||||||.|||||||||||||||||.::||
RBAM_032450__    201 LHFAVIDEVDSILVDEARTPLIISGQAQKSTKLYVQANAFVRTLKKDQDY    250

BSNT_05370___    251 TYDIKTKAVQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAM    300
                     |||:|||.|||||||||||||.||||||||||:||||||||||||||.||
RBAM_032450__    251 TYDVKTKGVQLTEEGMTKAEKTFGIDNLFDVKNVALNHHINQALKAHAAM    300

BSNT_05370___    301 QKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEIQNESM    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032450__    301 QKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEIQNESM    350

BSNT_05370___    351 TLATITFQNYFRMYQKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNRPVVR    400
                     ||||||||||||||:|||||||||||||||||||||||||:||||:||:|
RBAM_032450__    351 TLATITFQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVSIPTNQPVIR    400

BSNT_05370___    401 DDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLK    450
                     |||||||||:||||||||||||||||||||||||||||||||||||||||
RBAM_032450__    401 DDRPDLIYRSMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLK    450

BSNT_05370___    451 NKGIPHQVLNAKNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLGEGVK    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032450__    451 NKGIPHQVLNAKNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLGEGVK    500

BSNT_05370___    501 ELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032450__    501 ELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFG    550

BSNT_05370___    551 AERTMAMLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYD    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032450__    551 AERTMAMLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYD    600

BSNT_05370___    601 DVLRQQREVIYKQRFEVIDSENLREIVENMIKSSLERAIAAYTPREELPE    650
                     ||||||||||||||||||||||||:|||.|||||||||||||||:|||||
RBAM_032450__    601 DVLRQQREVIYKQRFEVIDSENLRDIVEGMIKSSLERAIAAYTPKEELPE    650

BSNT_05370___    651 EWKLDGLVDLINTTYLDEGALEKSDIFGKEPDEMLELIMDRIITKYNEKE    700
                     ||.|||||:|:|:|||||||||||||||||||||.|:|||||:|||||||
RBAM_032450__    651 EWNLDGLVELVNSTYLDEGALEKSDIFGKEPDEMHEMIMDRIMTKYNEKE    700

BSNT_05370___    701 EQFGKEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLR    750
                     |.||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_032450__    701 ENFGTEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLR    750

BSNT_05370___    751 EYQMEGFAMFEHMIESIEDEVAKFVMKAEIENNLEREEVVQGQTTAHQPQ    800
                     |||||||||||||||||||||||||||||||:||||||||||||||||||
RBAM_032450__    751 EYQMEGFAMFEHMIESIEDEVAKFVMKAEIESNLEREEVVQGQTTAHQPQ    800

BSNT_05370___    801 EGDDNKKAKKAPVRKVVDIGRNAPCHCGSGKKYKNCCGRTE    841
                     :||:.|:||||||||||||||||||||||||||||||||||
RBAM_032450__    801 DGDEAKQAKKAPVRKVVDIGRNAPCHCGSGKKYKNCCGRTE    841


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