Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05370 and RBAM_032450

See Amino acid alignment / Visit BSNT_05370 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:50
# Commandline: needle
#    -asequence dna-align/BSNT_05370___secA.1.9828.seq
#    -bsequence dna-align/RBAM_032450___secA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05370___secA-RBAM_032450___secA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05370___secA-RBAM_032450___secA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05370___secA
# 2: RBAM_032450___secA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2530
# Identity:    2120/2530 (83.8%)
# Similarity:  2120/2530 (83.8%)
# Gaps:           8/2530 ( 0.3%)
# Score: 8969.0
# 
#
#=======================================

BSNT_05370___      1 ATGCTTGGAATTTTAAATAAAATGTTTGATCCAACAAAACGTACGCTGAA     50
                     ||||||||.|||||||||||||||||||||||.||.||||||.|||||||
RBAM_032450__      1 ATGCTTGGGATTTTAAATAAAATGTTTGATCCGACCAAACGTGCGCTGAA     50

BSNT_05370___     51 TAGATACGAAAAAATTGCTAACGATATTGATGCGATTCGCGGAGACTATG    100
                     .|.||||||||||||.||.||.||.||||||||..|..|.|||||.||||
RBAM_032450__     51 CAAATACGAAAAAATAGCAAATGACATTGATGCCGTAAGAGGAGATTATG    100

BSNT_05370___    101 AAAATCTCTCTGACGACGCGTTGAAACATAAAACAATTGAATTTAAAGAG    150
                     ||||||||||||||||.|||.|.|||||||||||....||||||||||||
RBAM_032450__    101 AAAATCTCTCTGACGAGGCGCTTAAACATAAAACGGCAGAATTTAAAGAG    150

BSNT_05370___    151 CGTCTTGAAAAAGGGGCGACAACGGATGATCTTCTTGTTGAAGCTTTCGC    200
                     ||.|||||||||||.|..||.||||||||.||||||||.|||||.||.||
RBAM_032450__    151 CGGCTTGAAAAAGGAGAAACGACGGATGACCTTCTTGTCGAAGCGTTTGC    200

BSNT_05370___    201 TGTTGTTCGAGAAGCTTCACGCCGCGTAACAGGTATGTTTCCGTTTAAAG    250
                     .||.|||||.||||||||.|||||||||||.||.|||||.||||||||||
RBAM_032450__    201 CGTCGTTCGTGAAGCTTCCCGCCGCGTAACCGGCATGTTCCCGTTTAAAG    250

BSNT_05370___    251 TCCAGCTCATGGGGGGCGTAGCGCTTCATGACGGAAATATCGCGGAAATG    300
                     |.|||||.|||||||||.|.||.||||||||.||.||.|||.|.||||||
RBAM_032450__    251 TACAGCTGATGGGGGGCATCGCCCTTCATGAAGGGAACATCTCCGAAATG    300

BSNT_05370___    301 AAAACAGGGGAAGGGAAAACATTAACGTCTACTCTGCCTGTTTATTTAAA    350
                     ||||||||||||||||||||..|.|||||.||.||.||.||.||||||||
RBAM_032450__    301 AAAACAGGGGAAGGGAAAACGCTGACGTCCACGCTTCCCGTGTATTTAAA    350

BSNT_05370___    351 TGCGTTAACAGGTAAAGGCGTACACGTCGTGACTGTCAACGAATACTTGG    400
                     ||||||.||.||.||||||||.||||||||.||.|||||||||||..|||
RBAM_032450__    351 TGCGTTGACGGGAAAAGGCGTTCACGTCGTAACGGTCAACGAATATCTGG    400

BSNT_05370___    401 CAAGCCGTGACGCTGAACAAATGGGGAAAATTTTCGAGTTTCTCGGTCTG    450
                     |.||||||||.||..|.||||||||..||||.||.|.|||||||||.||.
RBAM_032450__    401 CGAGCCGTGATGCCCAGCAAATGGGAGAAATCTTTGCGTTTCTCGGGCTT    450

BSNT_05370___    451 ACTGTCGGCTTGAATTTAAACTCAATGTCAAAAGACGAAAAACGGGAAGC    500
                     ||.||||||.||||..|.||.||.|||||||||||||||||.||.|||||
RBAM_032450__    451 ACAGTCGGCCTGAACCTGAATTCGATGTCAAAAGACGAAAAGCGTGAAGC    500

BSNT_05370___    501 TTATGCAGCTGACATTACTTACTCTACAAACAATGAGCTTGGCTTCGACT    550
                     |||.|||||.||.||.||.||.||.||.||||||||.||.|||||.||.|
RBAM_032450__    501 TTACGCAGCCGATATCACGTATTCAACGAACAATGAACTCGGCTTTGATT    550

BSNT_05370___    551 ATTTGCGTGACAATATGGTTCTTTATAAAGAGCAGATGGTTCAGCGCCCG    600
                     |||||||||||||.|||||.||.||||||||.||||||||.|||||||||
RBAM_032450__    551 ATTTGCGTGACAACATGGTGCTCTATAAAGAACAGATGGTGCAGCGCCCG    600

BSNT_05370___    601 CTTCATTTTGCGGTAATAGATGAAGTTGACTCTATTTTAATTGATGAAGC    650
                     |||||||||||.||.||.||||||||.||.||.||||||.|.||||||||
RBAM_032450__    601 CTTCATTTTGCCGTTATTGATGAAGTCGATTCAATTTTAGTCGATGAAGC    650

BSNT_05370___    651 GAGAACACCTCTTATCATTTCTGGACAAGCTGCCAAATCCACTAAGCTGT    700
                     ||||||.||..|.||.|||||.|||||||||...||.|||||.||.||||
RBAM_032450__    651 GAGAACGCCATTGATTATTTCCGGACAAGCTCAGAAGTCCACAAAACTGT    700

BSNT_05370___    701 ACGTACAGGCAAATGCTTTTGTCCGTACGTT----AAAAGCGGAGAAGGA    746
                     ||||.|||||||||||.||||||||.||..|    |||    ||..||||
RBAM_032450__    701 ACGTGCAGGCAAATGCGTTTGTCCGCACACTCAAGAAA----GATCAGGA    746

BSNT_05370___    747 TTACACGTACGATATCAAAACAAAAGCTGTACAGCTTACTGAAGAAGGAA    796
                     |||.|||||.||..|||||||.||.|..||.|||||.||.||||||||||
RBAM_032450__    747 TTATACGTATGACGTCAAAACGAAGGGCGTTCAGCTGACGGAAGAAGGAA    796

BSNT_05370___    797 TGACGAAGGCGGAAAAAGCGTTCGGCATCGATAACCTCTTTGATGTGAAG    846
                     ||||||||||.||||||.|||||||||||||.|||||.||||||||.||.
RBAM_032450__    797 TGACGAAGGCTGAAAAAACGTTCGGCATCGACAACCTGTTTGATGTCAAA    846

BSNT_05370___    847 CATGTCGCGCTCAACCACCATATCAACCAGGCCTTAAAAGCTCACGTTGC    896
                     .|.||.||..|.||||||||||||||||||||.||||||||.||.|..||
RBAM_032450__    847 AACGTGGCCTTGAACCACCATATCAACCAGGCTTTAAAAGCCCATGCGGC    896

BSNT_05370___    897 GATGCAAAAGGACGTTGACTATGTAGTGGAAGACGGACAGGTTGTTATTG    946
                     ||||||.||.|||||.||.|||||.||.||.|||||.|||||.||.||.|
RBAM_032450__    897 GATGCAGAAAGACGTGGATTATGTTGTTGAGGACGGCCAGGTCGTCATCG    946

BSNT_05370___    947 TTGATTCCTTCACGGGACGTCTGATGAAAGGCCGCCGCTACAGTGAGGGG    996
                     |||||||||||||.||.||||||||||||||.|||||||||||.||.||.
RBAM_032450__    947 TTGATTCCTTCACCGGCCGTCTGATGAAAGGACGCCGCTACAGCGAAGGT    996

BSNT_05370___    997 CTTCACCAAGCGATTGAAGCGAAGGAAGGGCTTGAGATTCAAAACGAAAG   1046
                     ||||||||.||||||||.|||||.|||||.||.|||||||||||.|||||
RBAM_032450__    997 CTTCACCAGGCGATTGAGGCGAAAGAAGGCCTGGAGATTCAAAATGAAAG   1046

BSNT_05370___   1047 CATGACCTTGGCGACGATTACGTTCCAAAACTACTTCCGAATGTACCAAA   1096
                     ||||||.||||||||||||||||||||||||||.|||||.||||||.|||
RBAM_032450__   1047 CATGACATTGGCGACGATTACGTTCCAAAACTATTTCCGTATGTACGAAA   1096

BSNT_05370___   1097 AACTTGCCGGTATGACGGGTACAGCTAAGACAGAGGAAGAAGAATTCCGC   1146
                     |.||.|||||||||||.|||||.||.||.||.||.||.||||||||||||
RBAM_032450__   1097 AGCTGGCCGGTATGACCGGTACCGCAAAAACGGAAGAGGAAGAATTCCGC   1146

BSNT_05370___   1147 AACATCTACAACATGCAGGTTGTCACGATCCCTACCAACAGGCCTGTTGT   1196
                     ||.||.||.||||||||||||||..|.|||||.||||||..|||.||..|
RBAM_032450__   1147 AATATTTATAACATGCAGGTTGTATCCATCCCGACCAACCAGCCGGTCAT   1196

BSNT_05370___   1197 CCGTGATGACCGTCCTGATTTAATTTACCGCACGATGGAAGGAAAGTTTA   1246
                     ||||||.||||||||.||.||.||.||||||.|.||||||||.||.||.|
RBAM_032450__   1197 CCGTGACGACCGTCCGGACTTGATCTACCGCTCAATGGAAGGGAAATTCA   1246

BSNT_05370___   1247 AGGCAGTTGCGGAGGATGTCGCACAGCGTTACATGACGGGACAGCCTGTT   1296
                     ||||.||.||||||||||||||.|||||.||||||||.||||||||.|||
RBAM_032450__   1247 AGGCGGTGGCGGAGGATGTCGCCCAGCGCTACATGACCGGACAGCCGGTT   1296

BSNT_05370___   1297 CTAGTCGGTACGGTTGCCGTTGAAACATCTGAATTGATTTCTAAGCTGCT   1346
                     ||.|||||.|||||||||||||||||.|||||||||||||||||.||.||
RBAM_032450__   1297 CTTGTCGGCACGGTTGCCGTTGAAACGTCTGAATTGATTTCTAAACTTCT   1346

BSNT_05370___   1347 TAAAAACAAAGGAATTCCGCATCAAGTGTTAAATGCCAAAAACCATGAAC   1396
                     .|||||||||||.|||||||||||.|||.|.|||||||||||||||||.|
RBAM_032450__   1347 GAAAAACAAAGGGATTCCGCATCAGGTGCTGAATGCCAAAAACCATGAGC   1396

BSNT_05370___   1397 GTGAAGCGCAGATCATTGAAGAGGCCGGCCAAAAAGGCGCAGTTACGATT   1446
                     |||||||.|||||.||||||||.||.||.|||||||||||.||.||||||
RBAM_032450__   1397 GTGAAGCTCAGATTATTGAAGAAGCGGGACAAAAAGGCGCTGTCACGATT   1446

BSNT_05370___   1447 GCGACTAACATGGCGGGGCGCGGAACGGACATTAAGCTTGGCGAAGGTGT   1496
                     |||||.|||||||||||.||||||||.||||||||.||.||||||||.||
RBAM_032450__   1447 GCGACCAACATGGCGGGACGCGGAACCGACATTAAACTCGGCGAAGGCGT   1496

BSNT_05370___   1497 AAAAGAGCTTGGCGGACTCGCTGTTGTCGGAACAGAACGACATGAATCAC   1546
                     |||||||||||||||.||.||.||.|||||.||.|||||.||.|||||.|
RBAM_032450__   1497 AAAAGAGCTTGGCGGCCTTGCAGTCGTCGGTACGGAACGCCACGAATCCC   1546

BSNT_05370___   1547 GCCGGATTGACAATCAGCTTCGAGGTCGTTCCGGACGTCAGGGAGACCCG   1596
                     |||||||||||||||||||.||.||.|||||.||||||||||||||||||
RBAM_032450__   1547 GCCGGATTGACAATCAGCTCCGCGGACGTTCAGGACGTCAGGGAGACCCG   1596

BSNT_05370___   1597 GGGATTACTCAATTTTATCTTTCTATGGAAGATGAATTGATGCGCAGATT   1646
                     ||.||.||.||||||||||||||.|||||||||||||||||||||.|.||
RBAM_032450__   1597 GGCATCACACAATTTTATCTTTCAATGGAAGATGAATTGATGCGCCGTTT   1646

BSNT_05370___   1647 CGGAGCTGAGCGGACAATGGCGATGCTGGACCGCTTCGGCATGGACGACT   1696
                     |||||||||.|||||.|||||||||||.|||||.|||||.|||||.||||
RBAM_032450__   1647 CGGAGCTGAACGGACGATGGCGATGCTTGACCGGTTCGGTATGGATGACT   1696

BSNT_05370___   1697 CTACTCCAATCCAAAGCAAAATGGTATCTCGCGCGGTTGAATCGTCTCAA   1746
                     |.||.||.||.||.|||||||||||.||.|||||.||.|||||.||||||
RBAM_032450__   1697 CCACGCCGATTCAGAGCAAAATGGTGTCACGCGCCGTGGAATCATCTCAA   1746

BSNT_05370___   1747 AAACGAGTCGAAGGCAATAACTTCGATTCTCGTAAACAGCTTCTGCAATA   1796
                     |||||.||||||||.||.|||||.|||||.||||||||||||||.|||||
RBAM_032450__   1747 AAACGTGTCGAAGGAAACAACTTTGATTCACGTAAACAGCTTCTTCAATA   1796

BSNT_05370___   1797 TGATGATGTTCTCCGCCAGCAGCGTGAGGTCATTTATAAGCAGCGCTTTG   1846
                     |||.||.||.|||||.||||||||.||.||||||||.||||||||.||||
RBAM_032450__   1797 TGACGACGTGCTCCGTCAGCAGCGCGAAGTCATTTACAAGCAGCGTTTTG   1846

BSNT_05370___   1847 AAGTCATTGACTCTGAAAACCTGCGTGAAATCGTTGAAAATATGATCAAG   1896
                     ||||||||||||||||||||||||||||.||.||.|||...|||||||||
RBAM_032450__   1847 AAGTCATTGACTCTGAAAACCTGCGTGACATTGTGGAAGGCATGATCAAG   1896

BSNT_05370___   1897 TCTTCTCTCGAACGCGCAATTGCAGCCTATACGCCAAGAGAAGAGCTTCC   1946
                     ||||||||.||.||.||.|||||.||.||||||||.|.|||.||||||||
RBAM_032450__   1897 TCTTCTCTGGAGCGTGCGATTGCCGCTTATACGCCGAAAGAGGAGCTTCC   1946

BSNT_05370___   1947 TGAGGAGTGGAAGCTTGACGGTCTAGTTGATCTTATCAACACAACTTATC   1996
                     .||.||.|||||.||||||||.||.||.||.||..|.||..||||.||||
RBAM_032450__   1947 GGAAGAATGGAATCTTGACGGCCTCGTGGAGCTGGTGAATTCAACGTATC   1996

BSNT_05370___   1997 TTGATGAAGGTGCGCTTGAGAAGAGCGATATCTTCGGGAAAGAACCGGAT   2046
                     ||||||||||.||.|||||.|||||||||||||||||.||||||||||||
RBAM_032450__   1997 TTGATGAAGGCGCACTTGAAAAGAGCGATATCTTCGGAAAAGAACCGGAT   2046

BSNT_05370___   2047 GAAATGCTTGAGCTCATTATGGATCGCATCATCACAAAATATAATGAGAA   2096
                     |||||||.||||.|.||.|||||.||||||||.||||||||||||||.||
RBAM_032450__   2047 GAAATGCATGAGATGATCATGGACCGCATCATGACAAAATATAATGAAAA   2096

BSNT_05370___   2097 GGAAGAGCAATTCGGCAAAGAGCAAATGCGCGAATTCGAAAAAGTTATCG   2146
                     .||||||.|.|||||||.||||||.|||||.|||||.||||||||.||||
RBAM_032450__   2097 AGAAGAGAATTTCGGCACAGAGCAGATGCGTGAATTTGAAAAAGTCATCG   2146

BSNT_05370___   2147 TTCTTCGTGCCGTTGATTCTAAATGGATGGATCATATTGATGCGATGGAT   2196
                     |..|.||||||||||||||.||||||||||||||||||||||||||||||
RBAM_032450__   2147 TATTGCGTGCCGTTGATTCAAAATGGATGGATCATATTGATGCGATGGAT   2196

BSNT_05370___   2197 CAGCTTCGCCAAGGGATTCACCTTCGTGCTTACGCGCAGACGAACCCTCT   2246
                     |||||.||.||||||||||||||.||.|||||.||||||||.||.||.||
RBAM_032450__   2197 CAGCTGCGTCAAGGGATTCACCTCCGCGCTTATGCGCAGACAAATCCGCT   2246

BSNT_05370___   2247 TCGTGAGTATCAAATGGAAGGTTTTGCGATGTTTGAGCATATGATTGAAT   2296
                     .|||||.||||||||||||||.||.||.|||||||||||.||||||||.|
RBAM_032450__   2247 GCGTGAATATCAAATGGAAGGCTTCGCAATGTTTGAGCACATGATTGAGT   2296

BSNT_05370___   2297 CAATTGAGGACGAGGTCGCAAAATTTGTGATGAAAGCTGAGATTGAAAAC   2346
                     |.|||||||||||.||.||.|||||.||.|||||.||.||||||||||.|
RBAM_032450__   2297 CCATTGAGGACGAAGTTGCGAAATTCGTCATGAAGGCCGAGATTGAAAGC   2346

BSNT_05370___   2347 AATCTGGAGCGTGAAGAGGTTGTACAAGGCCAAACAACAGCTCATCAGCC   2396
                     ||||||||.||.|||||.|||||.||.||||||||.||.|||||||||||
RBAM_032450__   2347 AATCTGGAACGCGAAGAAGTTGTTCAGGGCCAAACGACGGCTCATCAGCC   2396

BSNT_05370___   2397 GCAAGAAGGCGACGATAACAAAAAAGCAAAGAAAGCACCGGTTCGCAAAG   2446
                     |||.||.|||||.||...||||.||||.||.|||||.|||||.||.||||
RBAM_032450__   2397 GCAGGACGGCGATGAGGCCAAACAAGCGAAAAAAGCGCCGGTGCGAAAAG   2446

BSNT_05370___   2447 TGGTTGATATCGGCCGAAATGCCCCATGCCACTGCGGAAGCGGGAAAAAA   2496
                     |.||.||||||||.||.||.||.||.|||||.|||||.|||||.||||||
RBAM_032450__   2447 TTGTGGATATCGGACGCAACGCGCCTTGCCATTGCGGCAGCGGAAAAAAA   2496

BSNT_05370___   2497 TATAAAAATTGCTGCGGCCGTACTGAATAG   2526
                     ||||||||||||||||||||.||.||||||
RBAM_032450__   2497 TATAAAAATTGCTGCGGCCGGACAGAATAG   2526


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