Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05366 and RBAM_032420

See DNA alignment / Visit BSNT_05366 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:49
# Commandline: needle
#    -asequence pep-align/BSNT_05366___cccB.1.9828.seq
#    -bsequence pep-align/RBAM_032420___cccB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05366___cccB-RBAM_032420___cccB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05366___cccB-RBAM_032420___cccB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05366___cccB
# 2: RBAM_032420___cccB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:      80/113 (70.8%)
# Similarity:    94/113 (83.2%)
# Gaps:           1/113 ( 0.9%)
# Score: 411.0
# 
#
#=======================================

BSNT_05366___      1 MKSKLSILMIGFALSVLLAAC-GSNDAKEEKTDTGSKTEATASEGEELYQ     49
                     ||||.::|.:...:||||||| |||::|:|.:|:...::|:||.||||||
RBAM_032420__      1 MKSKWALLALVLTMSVLLAACGGSNESKKESSDSSGGSKASASAGEELYQ     50

BSNT_05366___     50 QSCVGCHGKDLEGVSGPNLQEVGGKYDEHKIESIIKNGRGNMPKGLVEDN     99
                     |||:|||||||||..|||||||||||||.||||||||||||||..||.|.
RBAM_032420__     51 QSCIGCHGKDLEGGGGPNLQEVGGKYDEAKIESIIKNGRGNMPSHLVNDE    100

BSNT_05366___    100 EAAVIAKWLSEKK    112
                     |||.||||||:||
RBAM_032420__    101 EAAKIAKWLSQKK    113


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