Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05366 and RBAM_032420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:49
# Commandline: needle
# -asequence dna-align/BSNT_05366___cccB.1.9828.seq
# -bsequence dna-align/RBAM_032420___cccB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05366___cccB-RBAM_032420___cccB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05366___cccB-RBAM_032420___cccB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05366___cccB
# 2: RBAM_032420___cccB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 365
# Identity: 245/365 (67.1%)
# Similarity: 245/365 (67.1%)
# Gaps: 49/365 (13.4%)
# Score: 821.5
#
#
#=======================================
BSNT_05366___ 1 ATGAAATCAAAGTTATCGATACTAATGATTGGATTTGCGCT--TTCT--- 45
|||||||||||.|...||.|.| |.||||| ||||
RBAM_032420__ 1 ATGAAATCAAAATGGGCGCTGC------------TGGCGCTGGTTCTGAC 38
BSNT_05366___ 46 -------GTTCTGTTGGCTGCCTGCGGATCAAACGATGCAAAAGAAGAGA 88
||.|||.||||.||.||||| ||.|.|.||.|||..||
RBAM_032420__ 39 CATGTCCGTCCTGCTGGCGGCATGCGG------CGGTTCCAATGAATCGA 82
BSNT_05366___ 89 AGACAGA---CACTGGCAG--CAAGACGG-----AAGCCACTGCATCTGA 128
|.|.||| |.|||.||| | ||.||| ||||..||||.||.|.
RBAM_032420__ 83 AAAAAGAAAGCTCTGACAGTTC-AGGCGGGTCAAAAGCATCTGCGTCAGC 131
BSNT_05366___ 129 AGGGGAAGAATTATATCAGCAAAGCTGCGTAGGCTGCCACGGCAAGGATT 178
|||.|||||..|.||||||||||||||..|.|||||||||||.||.||.|
RBAM_032420__ 132 AGGAGAAGAGCTTTATCAGCAAAGCTGTATCGGCTGCCACGGAAAAGACT 181
BSNT_05366___ 179 TAGAAGGTGTGTCAGGGCCTAATCTCCAAGAGGTCGGAGGCAAATACGAT 228
|||||||.|....|||.||.|||.|.||.||.|||||.||.||.||.|||
RBAM_032420__ 182 TAGAAGGCGGCGGAGGTCCGAATTTACAGGAAGTCGGCGGGAAGTATGAT 231
BSNT_05366___ 229 GAACACAAAATTGAAAGCATTATTAAAAACGGCCGCGGCAATATGCCAAA 278
|||...||||||||||||||.|||||||||||.||||||||||||||
RBAM_032420__ 232 GAAGCTAAAATTGAAAGCATCATTAAAAACGGACGCGGCAATATGCC--- 278
BSNT_05366___ 279 GGGG----CTTGTAGAGGATAACGAAGCCGCTGTTATTGCCAAATGGCTG 324
|.| ||||||.|.|||.|.||||||||....||.||.|||||||||
RBAM_032420__ 279 -GAGCCATCTTGTAAATGATGAGGAAGCCGCGAAGATCGCAAAATGGCTG 327
BSNT_05366___ 325 TCAGAAAAAAAGTAA 339
|||.|.|||||.|||
RBAM_032420__ 328 TCACAGAAAAAATAA 342
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