Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05364 and RBAM_032400

See DNA alignment / Visit BSNT_05364 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:49
# Commandline: needle
#    -asequence pep-align/BSNT_05364___ftsX.1.9828.seq
#    -bsequence pep-align/RBAM_032400___ftsX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05364___ftsX-RBAM_032400___ftsX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05364___ftsX-RBAM_032400___ftsX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05364___ftsX
# 2: RBAM_032400___ftsX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     243/299 (81.3%)
# Similarity:   263/299 (88.0%)
# Gaps:          24/299 ( 8.0%)
# Score: 1237.0
# 
#
#=======================================

BSNT_05364___      1 ------------------------MTFASISAVTVTLILVGVFLVIMLNL     26
                                             ||||||||||||||||||||||||||
RBAM_032400__      1 MVLMIKILGRHLRESFKSLGRNTWMTFASISAVTVTLILVGVFLVIMLNL     50

BSNT_05364___     27 NNMATNAEKQVEIKVLIDLTADQKAQDKLQNDIKELKGIQSVTFSSKEKE     76
                     ||||.||||:||||||||||:::|.||.|||:||::.|||||.||||:||
RBAM_032400__     51 NNMAKNAEKEVEIKVLIDLTSNKKTQDTLQNEIKDISGIQSVEFSSKDKE    100

BSNT_05364___     77 LDQLVDSFGDSGKSLTMKDQENPLNDAFVVKTTDPHDTPNVAKKIEKMDH    126
                     |||||.|||||||::.|:|||||||:||:||||||||||.|||||||:||
RBAM_032400__    101 LDQLVKSFGDSGKAMKMQDQENPLNNAFIVKTTDPHDTPKVAKKIEKLDH    150

BSNT_05364___    127 VYKVTYGKEEVSRLFKVVGVSRNIGIALIIGLVFTAMFLISNTIKITIFA    176
                     ||||||||||||||||:|||||||||||||||:|||||||||||||||||
RBAM_032400__    151 VYKVTYGKEEVSRLFKIVGVSRNIGIALIIGLLFTAMFLISNTIKITIFA    200

BSNT_05364___    177 RRKEIEIMKLVGATNWFIRWPFFLEGLLLGVFGSVIPIALVLSTYQYVIG    226
                     ||||||||||||||||||||||||||||||||||:|||||||||||.::.
RBAM_032400__    201 RRKEIEIMKLVGATNWFIRWPFFLEGLLLGVFGSIIPIALVLSTYQSMVA    250

BSNT_05364___    227 WVVPKVQGSFVSLLPYNPFVFQVSLVLIAIGAVIGVWGSLTSIRKFLRV    275
                     ||.|||||||||||||:|||||||||||.||||||||||||||||||||
RBAM_032400__    251 WVAPKVQGSFVSLLPYSPFVFQVSLVLILIGAVIGVWGSLTSIRKFLRV    299


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