Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05364 and RBAM_032400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:49
# Commandline: needle
# -asequence dna-align/BSNT_05364___ftsX.1.9828.seq
# -bsequence dna-align/RBAM_032400___ftsX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05364___ftsX-RBAM_032400___ftsX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05364___ftsX-RBAM_032400___ftsX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05364___ftsX
# 2: RBAM_032400___ftsX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 901
# Identity: 675/901 (74.9%)
# Similarity: 675/901 (74.9%)
# Gaps: 74/901 ( 8.2%)
# Score: 2747.0
#
#
#=======================================
BSNT_05364___ 0 -------------------------------------------------- 0
RBAM_032400__ 1 ATGGTTCTTATGATTAAAATTCTCGGGCGCCATTTGCGTGAGAGTTTTAA 50
BSNT_05364___ 1 ----------------------ATGACATTTGCATCCATTAGTGCTGTAA 28
|||||||||||||||||.|||||.||.|
RBAM_032400__ 51 ATCTCTCGGAAGAAACACATGGATGACATTTGCATCCATCAGTGCCGTTA 100
BSNT_05364___ 29 CCGTTACGCTGATTTTAGTCGGCGTGTTTTTAGTGATTATGCTGAATTTG 78
|||||||..|||||||.|||||||||||||||||.||||||||||||||.
RBAM_032400__ 101 CCGTTACATTGATTTTGGTCGGCGTGTTTTTAGTCATTATGCTGAATTTA 150
BSNT_05364___ 79 AATAACATGGCCACGAATGCTGAAAAACAAGTCGAAATCAAAGTGCTGAT 128
||.||||||||.|..||||||||||||.||||.|||||.|||||..|.||
RBAM_032400__ 151 AACAACATGGCTAAAAATGCTGAAAAAGAAGTGGAAATTAAAGTATTAAT 200
BSNT_05364___ 129 TGATCTGACTGCAGATCAGAAGGCACAGGACAAGCTTCAGAACGATATTA 178
.||||||||..|..||.||||..|.|||||.|.|||.|||||.||.||||
RBAM_032400__ 201 CGATCTGACGTCTAATAAGAAAACGCAGGATACGCTGCAGAATGAGATTA 250
BSNT_05364___ 179 AGGAACTGAAGGGCATTCAGAGTGTCACTTTTTCATCTAAAGAAAAAGAG 228
|.||..|...|||.||.||.||.||....||||||||||||||.||||||
RBAM_032400__ 251 AAGACATCTCGGGAATCCAAAGCGTAGAGTTTTCATCTAAAGATAAAGAG 300
BSNT_05364___ 229 CTTGACCAGCTGGTTGACAGTTTTGGTGACAGCGGAAAATCCCTGACAAT 278
|||||.||..||||..|.||.||.||.|||||||||||..||.|||.|||
RBAM_032400__ 301 CTTGATCAATTGGTCAAAAGCTTCGGCGACAGCGGAAAGGCCATGAAAAT 350
BSNT_05364___ 279 GAAGGATCAGGAAAACCCGCTTAATGATGCGTTTGTCGTCAAAACGACAG 328
|.|.|||||||||||||||||.||..|.||||||.|||||||||||||||
RBAM_032400__ 351 GCAAGATCAGGAAAACCCGCTGAACAACGCGTTTATCGTCAAAACGACAG 400
BSNT_05364___ 329 ATCCGCATGATACGCCGAACGTGGCGAAAAAGATCGAAAAAATGGATCAT 378
|||||||||||||||||||.||.||||||||.||.||.||..|.||||||
RBAM_032400__ 401 ATCCGCATGATACGCCGAAAGTCGCGAAAAAAATTGAGAAGCTTGATCAT 450
BSNT_05364___ 379 GTTTATAAAGTCACTTATGGAAAAGAAGAGGTCAGCCGTTTGTTTAAAGT 428
||.||||||||.||.||.||.||||||||.|||||||||.|||||||..|
RBAM_032400__ 451 GTGTATAAAGTGACATACGGGAAAGAAGAAGTCAGCCGTCTGTTTAAGAT 500
BSNT_05364___ 429 GGTCGGCGTTTCCCGCAACATCGGAATCGCGTTAATTATCGGCCTGGTAT 478
.|||||.||.||.|||||||||||.||.||||||||.||||||||..|.|
RBAM_032400__ 501 CGTCGGGGTGTCACGCAACATCGGGATTGCGTTAATCATCGGCCTTCTGT 550
BSNT_05364___ 479 TTACGGCGATGTTCTTAATTTCCAACACCATTAAAATTACAATTTTCGCA 528
|.||||||||||||||||||||.||.||.||||||||.||.||||||||.
RBAM_032400__ 551 TCACGGCGATGTTCTTAATTTCAAATACGATTAAAATCACGATTTTCGCC 600
BSNT_05364___ 529 AGAAGAAAAGAAATTGAAATCATGAAGCTTGTCGGTGCGACAAACTGGTT 578
|||||||||||.|||||||||||||||||||||||.||||||||||||||
RBAM_032400__ 601 AGAAGAAAAGAGATTGAAATCATGAAGCTTGTCGGCGCGACAAACTGGTT 650
BSNT_05364___ 579 TATCCGCTGGCCGTTTTTCCTTGAAGGATTGCTGCTAGGCGTATTCGGTT 628
|||||||||||||||.|||||.|||||..|||||||.||.||||||||||
RBAM_032400__ 651 TATCCGCTGGCCGTTCTTCCTGGAAGGGCTGCTGCTGGGGGTATTCGGTT 700
BSNT_05364___ 629 CTGTGATTCCGATTGCACTGGTGCTGAGCACTTACCAATACG-TCATCGG 677
||.|.||.|||||.||.||.||||||||.||.||||||| || |..|||.
RBAM_032400__ 701 CTATCATACCGATCGCTCTCGTGCTGAGTACGTACCAAT-CGATGGTCGC 749
BSNT_05364___ 678 ATGGGTCGTTCCAAAGGTTCAAGGATCATTTGTCTCTCTTCTTCCTTATA 727
.|||||.|..||.||.|||||.||.||||||||.||.|||||.||.||.|
RBAM_032400__ 750 TTGGGTGGCCCCGAAAGTTCAGGGCTCATTTGTTTCACTTCTGCCGTACA 799
BSNT_05364___ 728 ATCCATTTGTATTCCAAGTTTCGCTAGTGCTGATTGCAATCGGCGCAGTA 777
.|||.|||||.||||||||.||.||.|||||.|||...||||||||.||.
RBAM_032400__ 800 GTCCGTTTGTGTTCCAAGTATCACTTGTGCTCATTCTGATCGGCGCGGTT 849
BSNT_05364___ 778 ATTGGAGTATGGGGAAGTCTGACTTCCATCCGCAAGTTTTTGCGAGTATA 827
||.|||||||||||||||||||||||||||||.||.||..|.||.|||||
RBAM_032400__ 850 ATCGGAGTATGGGGAAGTCTGACTTCCATCCGGAAATTCCTTCGTGTATA 899
BSNT_05364___ 828 A 828
|
RBAM_032400__ 900 A 900
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