Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05362 and RBAM_032380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:49
# Commandline: needle
# -asequence pep-align/BSNT_05362___yvjB.1.9828.seq
# -bsequence pep-align/RBAM_032380___yvjB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05362___yvjB-RBAM_032380___yvjB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05362___yvjB-RBAM_032380___yvjB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05362___yvjB
# 2: RBAM_032380___yvjB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 480
# Identity: 384/480 (80.0%)
# Similarity: 424/480 (88.3%)
# Gaps: 14/480 ( 2.9%)
# Score: 1958.0
#
#
#=======================================
BSNT_05362___ 1 MNQKIMAVIAAGSMLFGGAGVYAGINLLEMDKPQTAAVPATAQADSERDK 50
|.||::|||||.|::.|||.:...: :|.: :|:||.:
RBAM_032380__ 1 MKQKMIAVIAAVSIMCGGAHIAGAV------QPNS--------SDAERSR 36
BSNT_05362___ 51 AMDKIEKAYELISNEYVEKVDREKLLEGAIQGMLSTLNDPYSVYMDKQTA 100
||:|||||||||||||||.||:||||||||||||||||||||||||||||
RBAM_032380__ 37 AMEKIEKAYELISNEYVENVDKEKLLEGAIQGMLSTLNDPYSVYMDKQTA 86
BSNT_05362___ 101 KQFSDSLDSSFEGIGAEVGMEDGKIIIVSPFKKSPAEKAGLKPNDEIISI 150
||||||||||||||||||||||.|||||||||:|||||||||||||||||
RBAM_032380__ 87 KQFSDSLDSSFEGIGAEVGMEDNKIIIVSPFKQSPAEKAGLKPNDEIISI 136
BSNT_05362___ 151 NGESMAGKDLNHAVLKIRGKKGSSVSMKIQRPGTKKQLSFRIKRAEIPLE 200
|||||.||.||.|||||||||||.||:|||||||.|||||||||||||||
RBAM_032380__ 137 NGESMNGKGLNEAVLKIRGKKGSKVSIKIQRPGTDKQLSFRIKRAEIPLE 186
BSNT_05362___ 201 TVFASEKKVQGHSVGYIAISTFSEHTAEDFAKALRELEKKEIEGLVIDVR 250
|||||.|:..||.||||.|||||||||:|||.||::|||:.|:|||:|||
RBAM_032380__ 187 TVFASRKESGGHHVGYIGISTFSEHTAQDFAAALKKLEKQGIDGLVLDVR 236
BSNT_05362___ 251 GNPGGYLQSVEEILKHFVTKDQPYIQIAERNGDKKRYFSTLTHKKAYPVN 300
|||||||||||:|||||:|||.|||||||||||||:|||||.|||.||||
RBAM_032380__ 237 GNPGGYLQSVEQILKHFITKDMPYIQIAERNGDKKQYFSTLKHKKPYPVN 286
BSNT_05362___ 301 VITDKGSASASEILAGALKEAGHYDVVGDTSFGKGTVQQAVPMGDGSNIK 350
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032380__ 287 VITDKGSASASEILAGALKEAGHYDVVGDTSFGKGTVQQAVPMGDGSNIK 336
BSNT_05362___ 351 LTLYKWLTPNGNWIHKKGIEPTIAIKQPDYFSAGPLQLKEPLKVDMNNED 400
|||||||||.|||||||||.||||:.|||||:|||||||:||:.|||:.|
RBAM_032380__ 337 LTLYKWLTPKGNWIHKKGIAPTIAVSQPDYFAAGPLQLKQPLQPDMNSAD 386
BSNT_05362___ 401 VKHAQVLLKGLSFDPGREDGYFSKDMKKAVMAFQDQNKLNKTGVIDTRTA 450
|||||:|||||.|||||.||||||.|||||:||||:.||:||.|||.:||
RBAM_032380__ 387 VKHAQILLKGLGFDPGRADGYFSKTMKKAVLAFQDRYKLDKTAVIDKKTA 436
BSNT_05362___ 451 ETLNRQIEKKKSDEKNDLQLQTALKSLFVN 480
|.:|:.:.::|||||||||||.|||||||.
RBAM_032380__ 437 EKMNQLMNEQKSDEKNDLQLQMALKSLFVK 466
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