Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05361 and RBAM_032370

See DNA alignment / Visit BSNT_05361 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:49
# Commandline: needle
#    -asequence pep-align/BSNT_05361___yvzD.1.9828.seq
#    -bsequence pep-align/RBAM_032370___swrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05361___yvzD-RBAM_032370___swrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05361___yvzD-RBAM_032370___swrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05361___yvzD
# 2: RBAM_032370___swrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:      98/117 (83.8%)
# Similarity:   108/117 (92.3%)
# Gaps:           6/117 ( 5.1%)
# Score: 515.0
# 
#
#=======================================

BSNT_05361___      1 ------MREKKYYELVEQLKDRTQDVTFSATKALSLLMLFSRYLVNYTNV     44
                           :||||||||||||||||:|||||:||||||||||||||||||||
RBAM_032370__      1 MKRASIVREKKYYELVEQLKDRTKDVTFSSTKALSLLMLFSRYLVNYTNV     50

BSNT_05361___     45 ESVNDINEECAKHYFNYLMKNHKRLGINLTDIKRSMHLISGLLDVDVNHY     94
                     |.|:|||||||||||.||||||||||||||||||||.||||:::|:|:||
RBAM_032370__     51 ECVHDINEECAKHYFTYLMKNHKRLGINLTDIKRSMLLISGVIEVEVDHY    100

BSNT_05361___     95 LKDFSLSNVTLWMTQER    111
                     ||||||||||||||:||
RBAM_032370__    101 LKDFSLSNVTLWMTEER    117


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