Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05361 and RBAM_032370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:49
# Commandline: needle
# -asequence dna-align/BSNT_05361___yvzD.1.9828.seq
# -bsequence dna-align/RBAM_032370___swrA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05361___yvzD-RBAM_032370___swrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05361___yvzD-RBAM_032370___swrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05361___yvzD
# 2: RBAM_032370___swrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 354
# Identity: 284/354 (80.2%)
# Similarity: 284/354 (80.2%)
# Gaps: 18/354 ( 5.1%)
# Score: 1212.0
#
#
#=======================================
BSNT_05361___ 1 ------------------GTGCGTGAAAAAAAATATTATGAATTAGTGGA 32
||||||||||||||||||||||||||||||||
RBAM_032370__ 1 TTGAAGAGGGCAAGTATTGTGCGTGAAAAAAAATATTATGAATTAGTGGA 50
BSNT_05361___ 33 ACAATTAAAAGACAGAACACAAGACGTAACATTTTCAGCTACAAAAGCAC 82
||||.||||||||.|||||.|||||||.|||||||||.|.||||||||||
RBAM_032370__ 51 ACAACTAAAAGACCGAACAAAAGACGTTACATTTTCATCAACAAAAGCAC 100
BSNT_05361___ 83 TAAGTCTTCTTATGCTGTTCAGCAGATATTTGGTCAATTACACCAATGTC 132
||||||||||||||||||||||||||||..|||||||||||||.|||||.
RBAM_032370__ 101 TAAGTCTTCTTATGCTGTTCAGCAGATACCTGGTCAATTACACAAATGTT 150
BSNT_05361___ 133 GAATCAGTAAATGACATTAATGAGGAATGCGCCAAACATTATTTTAACTA 182
||||..||..|.||.||.||||||||.||.||.||.||||||||.|.|||
RBAM_032370__ 151 GAATGTGTTCACGATATCAATGAGGAGTGTGCAAAGCATTATTTCACCTA 200
BSNT_05361___ 183 CTTAATGAAAAACCATAAGCGATTAGGAATTAATCTGACAGATATAAAAA 232
||||||||||||||||||.||.||||||||.||||||||.|||||.|||.
RBAM_032370__ 201 CTTAATGAAAAACCATAAACGTTTAGGAATCAATCTGACGGATATTAAAC 250
BSNT_05361___ 233 GGTCGATGCATCTAATCAGCGGGTTATTGGATGTGGATGTAAACCACTAT 282
||||.||||.|.|.||||||||..||.|.||.|||||.||..||||||||
RBAM_032370__ 251 GGTCCATGCTTTTGATCAGCGGTGTAATCGAGGTGGAAGTCGACCACTAT 300
BSNT_05361___ 283 TTAAAGGATTTTTCACTATCGAATGTCACGCTGTGGATGACGCAAGAGAG 332
.|.||.|||||.||.||.||.|||||.|||.|||||||||||.|||||||
RBAM_032370__ 301 CTGAAAGATTTCTCTCTTTCAAATGTGACGTTGTGGATGACGGAAGAGAG 350
BSNT_05361___ 333 ATAA 336
|||.
RBAM_032370__ 351 ATAG 354
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