Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05360 and RBAM_032360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:49
# Commandline: needle
# -asequence pep-align/BSNT_05360___minJ.1.9828.seq
# -bsequence pep-align/RBAM_032360___yvjD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05360___minJ-RBAM_032360___yvjD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05360___minJ-RBAM_032360___yvjD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05360___minJ
# 2: RBAM_032360___yvjD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 397
# Identity: 310/397 (78.1%)
# Similarity: 345/397 (86.9%)
# Gaps: 1/397 ( 0.3%)
# Score: 1638.0
#
#
#=======================================
BSNT_05360___ 1 MSVQWGIELLKSAGLFFLHPLFWFFIIITLAFGYVRIKRERKTFHTRIAD 50
||||||||||||.|||||||:|||||||:||.||:||||||.||||:|||
RBAM_032360__ 1 MSVQWGIELLKSIGLFFLHPMFWFFIIISLACGYLRIKRERHTFHTKIAD 50
BSNT_05360___ 51 IYDDLKFTYTKGLIPGLLLSVILGGLGISIPLGLLAIIAVITAAAAFTLR 100
:||:|.|||.||||||:|||::..|||||||.|||.|||.:||.|:.|.|
RBAM_032360__ 51 MYDELIFTYIKGLIPGILLSILFFGLGISIPFGLLGIIAAVTALASLTFR 100
BSNT_05360___ 101 ANWMSAAYIVSVSMLIGFGLQIYQAEPFLERFPQGFAVVWPAVAVFLGLL 150
.||:|:|||||..|.|.|.||.....||.:||||.|.|.|.:.|||:|||
RBAM_032360__ 101 MNWLSSAYIVSAGMFIAFILQYTHTVPFADRFPQAFGVNWASAAVFMGLL 150
BSNT_05360___ 151 IITEGAVAYRSAHVRTSPALVVSSRGLPIGQQLANRVWLLPLFLLVPGNG 200
||||||.||||||::|||||||||||||||:|||||.|||||||||||:|
RBAM_032360__ 151 IITEGAAAYRSAHLKTSPALVVSSRGLPIGRQLANRAWLLPLFLLVPGSG 200
BSNT_05360___ 201 LESHLSWWPVFTVPGGSFHFLWIPYFVGFGQRVQGSLPETSIRITAKRVC 250
|||||||||||||||||||.:||||..||||||||||||.|||||||||.
RBAM_032360__ 201 LESHLSWWPVFTVPGGSFHLIWIPYIAGFGQRVQGSLPEVSIRITAKRVM 250
BSNT_05360___ 251 ILGLAVAVLGAASLLWTPLAGAAVCTALLGRIFLSIKQRVNDNAAPFYFS 300
|||:.|...|||:|.||||||||.|.|:|||:|||::||:||||||||||
RBAM_032360__ 251 ILGVIVTAFGAAALWWTPLAGAAACIAVLGRLFLSLRQRLNDNAAPFYFS 300
BSNT_05360___ 301 KRDQGLMVLGIIPNTPAEDLELKIGEIITKVNGIPVKNVSDFYEALQHNR 350
|||||||||||||||||:|||||||||||||||||||:|||||||||.||
RBAM_032360__ 301 KRDQGLMVLGIIPNTPADDLELKIGEIITKVNGIPVKHVSDFYEALQKNR 350
BSNT_05360___ 351 AYVKLEIIGLNGEIRFDQRASYEGEHHELGILFVKDDREDEAAASGS 397
|:||:|||||||||||||||||||||||||||||:|:.|.|...:.
RBAM_032360__ 351 AFVKMEIIGLNGEIRFDQRASYEGEHHELGILFVQDEHEHEEMTAL- 396
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