Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05356 and RBAM_032340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:48
# Commandline: needle
# -asequence pep-align/BSNT_05356___yvkB.1.9828.seq
# -bsequence pep-align/RBAM_032340___yvkB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05356___yvkB-RBAM_032340___yvkB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05356___yvkB-RBAM_032340___yvkB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05356___yvkB
# 2: RBAM_032340___yvkB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 208
# Identity: 106/208 (51.0%)
# Similarity: 147/208 (70.7%)
# Gaps: 19/208 ( 9.1%)
# Score: 571.0
#
#
#=======================================
BSNT_05356___ 1 -MRPTNKRILDAAMQLLVKKGYRATTTKEIAEKANVSEATIFRNFKNKQG 49
:|.|||||:||||.|:::|||||.|||||||||.|||||||||||||||
RBAM_032340__ 1 MLRTTNKRIIDAAMNLIIQKGYRAATTKEIAEKAKVSEATIFRNFKNKQG 50
BSNT_05356___ 50 LVEALLSQHSSNRGSILEQTEGDLYKDLLHIGTCLLEELEHRKDIIKISF 99
|::|::.|.:....|::.:.|||||:||||....||::||.:|::.:|..
RBAM_032340__ 51 LMKAMIEQQTPVPESMITKAEGDLYEDLLHFAATLLQQLEQKKEVFRICL 100
BSNT_05356___ 100 REPAMFQDVINHVTEYPQSMKQLLVDYLKTMGEKGVIQTGNEAEHADVFM 149
|||.:|:||:..:..||||:|:.|:.|.|.:.:|.:|..|:|..:|||||
RBAM_032340__ 101 REPELFEDVLQDIVVYPQSVKKHLIVYFKELTKKNMISPGSEEANADVFM 150
BSNT_05356___ 150 SIIFGYFIHRLHLGDRVISMPQEKMLEHSTALFVKGISAD---------- 189
::|||||||||.||.|||::.:|.||:|||.:|:|||:..
RBAM_032340__ 151 TMIFGYFIHRLQLGKRVITLSEETMLKHSTEIFMKGITGRSFSGSKEDEG 200
BSNT_05356___ 189 -------- 189
RBAM_032340__ 201 WVQRKNGR 208
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