Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05348 and RBAM_032300

See DNA alignment / Visit BSNT_05348 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:47
# Commandline: needle
#    -asequence pep-align/BSNT_05348___uvrA.1.9828.seq
#    -bsequence pep-align/RBAM_032300___uvrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05348___uvrA-RBAM_032300___uvrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05348___uvrA-RBAM_032300___uvrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05348___uvrA
# 2: RBAM_032300___uvrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 957
# Identity:     902/957 (94.3%)
# Similarity:   932/957 (97.4%)
# Gaps:           0/957 ( 0.0%)
# Score: 4664.0
# 
#
#=======================================

BSNT_05348___      1 MAMDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAE     50
                     ||:|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032300__      1 MAIDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAE     50

BSNT_05348___     51 GQRRYVESLSAYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032300__     51 GQRRYVESLSAYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTV    100

BSNT_05348___    101 GTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032300__    101 GTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKL    150

BSNT_05348___    151 QVLAPIVSGRKGAHVKVLEQIRKQGYVRVRIDGEMAELSDDIELEKNKKH    200
                     ||||||:|||||||||||:|||||||||||||||||||||||||||||||
RBAM_032300__    151 QVLAPIISGRKGAHVKVLDQIRKQGYVRVRIDGEMAELSDDIELEKNKKH    200

BSNT_05348___    201 SIEVVIDRIVVKEGVAARLSDSLETALRLSEGRVMIDVIGEEELMFSEHH    250
                     |||||||||||||||||||||||||||||.||||||||||:|||||||||
RBAM_032300__    201 SIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIGQEELMFSEHH    250

BSNT_05348___    251 ACPHCGFSIGELEPRLFSFNSPFGACPTCDGLGMKLEVDADLVIPNQDLS    300
                     |||.|||||||||||||||||||||||||||||:|||||.:|||||.:||
RBAM_032300__    251 ACPLCGFSIGELEPRLFSFNSPFGACPTCDGLGLKLEVDPELVIPNPELS    300

BSNT_05348___    301 LKENAVAPWTPISSQYYPQLLEAACTHYGIDMDVPVKDLPKHQLDKVLYG    350
                     |||:|:|||||||||||||||:|.|.||||||:.||||||||||||||||
RBAM_032300__    301 LKEHAIAPWTPISSQYYPQLLQAVCRHYGIDMETPVKDLPKHQLDKVLYG    350

BSNT_05348___    351 SGDDLIYFRYENDFGQIREGEIQFEGVLRNIERRYKETGSDFIREQMEQY    400
                     |||:.|||:|||||||:||.||:|||||||||||||||.||:||||||||
RBAM_032300__    351 SGDERIYFKYENDFGQVRENEIEFEGVLRNIERRYKETSSDYIREQMEQY    400

BSNT_05348___    401 MSQKSCPTCKGYRLKKEALAVLIDGRHIGKITELSVADALAFFKNLTLSE    450
                     ||||||||||||||||||||||::|||||.||||||.|||.|||||||||
RBAM_032300__    401 MSQKSCPTCKGYRLKKEALAVLVNGRHIGTITELSVGDALEFFKNLTLSE    450

BSNT_05348___    451 KDMQIANLILREIVERLSFLDKVGLDYLTLSRAAGTLSGGEAQRIRLATQ    500
                     ||||||:|||||||||||||||||||||||||||||||||||||||||||
RBAM_032300__    451 KDMQIADLILREIVERLSFLDKVGLDYLTLSRAAGTLSGGEAQRIRLATQ    500

BSNT_05348___    501 IGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032300__    501 IGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDT    550

BSNT_05348___    551 MMAADYLIDIGPGAGIHGGQVISAGTPEEVMEDPNSLTGSYLSGEKFIPL    600
                     |||||||||||||||||||:|||||||||||.|.:||||.||||.:|||:
RBAM_032300__    551 MMAADYLIDIGPGAGIHGGRVISAGTPEEVMNDADSLTGRYLSGAQFIPM    600

BSNT_05348___    601 PPERRKPDGRYIEIKGASENNLKKVNAKFPLGTFTAVTGVSGSGKSTLVN    650
                     ||||||||||:|||||||||||||.|||||||||||||||||||||||||
RBAM_032300__    601 PPERRKPDGRFIEIKGASENNLKKANAKFPLGTFTAVTGVSGSGKSTLVN    650

BSNT_05348___    651 EILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032300__    651 EILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPA    700

BSNT_05348___    701 TYTGVFDDIRDVFAQTNEAKVRGYKKGRFSFNVKGGRCEACRGDGIIKIE    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032300__    701 TYTGVFDDIRDVFAQTNEAKVRGYKKGRFSFNVKGGRCEACRGDGIIKIE    750

BSNT_05348___    751 MHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALPFFEN    800
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
RBAM_032300__    751 MHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALSFFEN    800

BSNT_05348___    801 IPKIKRKLQTLYDVGLGYITLGQPATTLSGGEAQRVKLASELHKRSTGRT    850
                     |||||||||||.||||||:|||||||||||||||||||||||||||||||
RBAM_032300__    801 IPKIKRKLQTLADVGLGYVTLGQPATTLSGGEAQRVKLASELHKRSTGRT    850

BSNT_05348___    851 LYILDEPTTGLHVDDIARLLVVLQRLVDNGDTVLVIEHNLDIIKTADYIV    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032300__    851 LYILDEPTTGLHVDDIARLLVVLQRLVDNGDTVLVIEHNLDIIKTADYIV    900

BSNT_05348___    901 DLGPEGGAGGGTIVASGTPEEITEVEESYTGRYLKPVIERDKARMKSLLK    950
                     |||||||||||||||||||||:.||:|||||||||||:||||.|||:||.
RBAM_032300__    901 DLGPEGGAGGGTIVASGTPEEVVEVKESYTGRYLKPVMERDKKRMKTLLA    950

BSNT_05348___    951 AKETATS    957
                     .||||.:
RBAM_032300__    951 EKETAAT    957


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