Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05342 and RBAM_032270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:47
# Commandline: needle
# -asequence pep-align/BSNT_05342___yvlB.1.9828.seq
# -bsequence pep-align/RBAM_032270___yvlB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05342___yvlB-RBAM_032270___yvlB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05342___yvlB-RBAM_032270___yvlB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05342___yvlB
# 2: RBAM_032270___yvlB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 365
# Identity: 298/365 (81.6%)
# Similarity: 332/365 (91.0%)
# Gaps: 0/365 ( 0.0%)
# Score: 1561.0
#
#
#=======================================
BSNT_05342___ 1 MMQEKERILKLVEEGKLTAQEALTLIEKLDSDYKEKEEKITALSVHVHDE 50
|.|||||||||||:|.||||||||||||||.:||||||:|||||..|.:.
RBAM_032270__ 1 MKQEKERILKLVEDGMLTAQEALTLIEKLDHEYKEKEEQITALSAEVQEP 50
BSNT_05342___ 51 EEPFTTAKKESGKPSLGAKLFDWIDSAVKKVKEVDLDLNFGHAYDVQHIF 100
.|.|.:..|.|.|||||||||||||||||||||.|||||||||::|||||
RBAM_032270__ 51 AEDFESGAKGSQKPSLGAKLFDWIDSAVKKVKEADLDLNFGHAHEVQHIF 100
BSNT_05342___ 101 QFKDTDFSSVELQIANGSVNIVPWEDDDIRAECQAKVYRADSQDAARHAF 150
||||::||::::||||||||||||.|:||||||||||||||||:|||.||
RBAM_032270__ 101 QFKDSEFSAIDMQIANGSVNIVPWADEDIRAECQAKVYRADSQEAARTAF 150
BSNT_05342___ 151 LQHIECEIKGNKFFIRTEKKTMKTNVTLYIPQKEYDKIRVKLFNGPVRGE 200
|||||||:||||||:||||||||||||||:||||||||||||||||:|||
RBAM_032270__ 151 LQHIECEVKGNKFFVRTEKKTMKTNVTLYVPQKEYDKIRVKLFNGPIRGE 200
BSNT_05342___ 201 HLHVKEFSAKTTNGVLSFSHLTAEKAIAETANGQIKLASHSCGTIEAETI 250
|||||||||||||||||||||||:||.|||||||||||.|.||.||||||
RBAM_032270__ 201 HLHVKEFSAKTTNGVLSFSHLTADKASAETANGQIKLAGHQCGAIEAETI 250
BSNT_05342___ 251 NGLIDLRGKSESIDVQSFNGNIAINVTESDCRSIYAKTTTGSVELAIPDD 300
||||||||.|||||||||||||.:.||...|||||.|||||:|::|:|||
RBAM_032270__ 251 NGLIDLRGSSESIDVQSFNGNIMLTVTAPHCRSIYTKTTTGNVDIALPDD 300
BSNT_05342___ 301 LAVKAELKSNLGSLSHELMDVEMLKEKNDTIQKEMMFTSNQAHDQNITVF 350
.|||||||||||||||||:|.|:|||||||||||:|..|||.|||::::|
RBAM_032270__ 301 SAVKAELKSNLGSLSHELIDAEILKEKNDTIQKELMLASNQGHDQHLSIF 350
BSNT_05342___ 351 SESLTGAIKLKYSQR 365
|||||||||||::||
RBAM_032270__ 351 SESLTGAIKLKHTQR 365
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