Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05341 and RBAM_032260

See DNA alignment / Visit BSNT_05341 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:47
# Commandline: needle
#    -asequence pep-align/BSNT_05341___yvlC.1.9828.seq
#    -bsequence pep-align/RBAM_032260___yvlC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05341___yvlC-RBAM_032260___yvlC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05341___yvlC-RBAM_032260___yvlC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05341___yvlC
# 2: RBAM_032260___yvlC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 66
# Identity:      44/66 (66.7%)
# Similarity:    57/66 (86.4%)
# Gaps:           3/66 ( 4.5%)
# Score: 228.5
# 
#
#=======================================

BSNT_05341___      1 MNKLYRSEKNKKIAGVIGGLAEYFNWDASLLRVITVILAIMTS-VLPVLL     49
                     |.:|||||||:|||||:||||||.|.||||||:|||:||::|| ::|:  
RBAM_032260__      1 MKRLYRSEKNRKIAGVVGGLAEYVNMDASLLRIITVVLALVTSGIVPI--     48

BSNT_05341___     50 IYIIWIFIVPSERDMK     65
                     :||||.|:||.|.|:|
RBAM_032260__     49 VYIIWCFVVPLEGDLK     64


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