Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05339 and RBAM_032250

See DNA alignment / Visit BSNT_05339 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:47
# Commandline: needle
#    -asequence pep-align/BSNT_05339___yvlD.1.9828.seq
#    -bsequence pep-align/RBAM_032250___yvlD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05339___yvlD-RBAM_032250___yvlD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05339___yvlD-RBAM_032250___yvlD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05339___yvlD
# 2: RBAM_032250___yvlD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 119
# Identity:     103/119 (86.6%)
# Similarity:   116/119 (97.5%)
# Gaps:           0/119 ( 0.0%)
# Score: 527.0
# 
#
#=======================================

BSNT_05339___      1 MVKWAVSILVNALLLIVIDGYIDSIHISSIGAAIIASLILSILNVLIKPL     50
                     |:||||||||||||||||.||.||:||||||||:|||:|||:|||||||:
RBAM_032250__      1 MIKWAVSILVNALLLIVIAGYFDSVHISSIGAAVIASVILSVLNVLIKPI     50

BSNT_05339___     51 LIIFTLPVTMVTLGLFLFVINAITLMMTASIMGDSFQIDGFGTAIWASVI    100
                     ::|.|||||:|||||||||||||||||||::||||||||||||||||||:
RBAM_032250__     51 IVILTLPVTVVTLGLFLFVINAITLMMTAALMGDSFQIDGFGTAIWASVV    100

BSNT_05339___    101 LSVFHLLIQKGILEPLRKK    119
                     ||||||||||||||||||:
RBAM_032250__    101 LSVFHLLIQKGILEPLRKR    119


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