Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05330 and RBAM_032210

See DNA alignment / Visit BSNT_05330 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:46
# Commandline: needle
#    -asequence pep-align/BSNT_05330___nagB.1.9828.seq
#    -bsequence pep-align/RBAM_032210___nagB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05330___nagB-RBAM_032210___nagB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05330___nagB-RBAM_032210___nagB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05330___nagB
# 2: RBAM_032210___nagB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 242
# Identity:     172/242 (71.1%)
# Similarity:   205/242 (84.7%)
# Gaps:           1/242 ( 0.4%)
# Score: 922.0
# 
#
#=======================================

BSNT_05330___      1 MKVMECQTYEELSQKAARITADTIKEKPDAVLGLATGGTPEGTYRELIRL     50
                     |.|:.|:.|||||:|||.|.|:|:|:||||||||||||||||.|:||:|:
RBAM_032210__      1 MNVITCRHYEELSEKAASIIAETVKQKPDAVLGLATGGTPEGVYKELVRM     50

BSNT_05330___     51 HQTENLSFQNITTVNLDEYAGLSSNAPNSYHFYMNDRLFQHIDSKPSRHF    100
                     |::|.|||:|:||:|||||||||....||||:|||...|.||||:..|||
RBAM_032210__     51 HRSEGLSFRNVTTINLDEYAGLSPEDKNSYHYYMNTHFFAHIDSRKDRHF    100

BSNT_05330___    101 IPNGNADDLEAECRRYEQLVESLGGTDIQLLGIGRNGHIGFNEPGTSFKS    150
                     :|:|.||||:|||.||::|:::|||.||||||||.|||||||||||.|:|
RBAM_032210__    101 LPDGRADDLDAECGRYDRLIQTLGGADIQLLGIGHNGHIGFNEPGTPFES    150

BSNT_05330___    151 RTHVVTLNEQTRQANARYFPSIDSVPKKALTMGIQTILSSKRILLLISGK    200
                     |||||.|||:|||||||||||||.||.|||||||.||||.||||::.|||
RBAM_032210__    151 RTHVVELNEETRQANARYFPSIDQVPVKALTMGIGTILSGKRILIMASGK    200

BSNT_05330___    201 SKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREAASLRP    242
                     |||:||::||:|.|||.|||||||.|.|||||||.:||... 
RBAM_032210__    201 SKAQAVKQLLDGRISEAFPASALHAHPDVTVLIDEKAAGGD-    241


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