Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05323 and RBAM_032160

See DNA alignment / Visit BSNT_05323 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:45
# Commandline: needle
#    -asequence pep-align/BSNT_05323.1.9828.seq
#    -bsequence pep-align/RBAM_032160___yvoF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05323-RBAM_032160___yvoF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05323-RBAM_032160___yvoF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05323
# 2: RBAM_032160___yvoF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 171
# Identity:      87/171 (50.9%)
# Similarity:    95/171 (55.6%)
# Gaps:          68/171 (39.8%)
# Score: 461.5
# 
#
#=======================================

BSNT_05323         1 MRKTDRHPVSGANSLWHVYQTVPFLKVVKNFIVIQIARYTPFIGMKNWLY     50
                     |||||||||||||||||||||||||||:||||:|||||||||:.:|||||
RBAM_032160__      1 MRKTDRHPVSGANSLWHVYQTVPFLKVMKNFIIIQIARYTPFLSVKNWLY     50

BSNT_05323        51 RTFLRMKVGNQTSFALMVMPDIMFPEKISVGTNTIIGYNTTILAHEY---     97
                     ||||:|.||.||||||||||||||||||:||.|:|||||||||||||   
RBAM_032160__     51 RTFLKMNVGKQTSFALMVMPDIMFPEKITVGKNSIIGYNTTILAHEYLIH    100

BSNT_05323        98 ---SGSAQF-----------------------------------------    103
                        :|....                                         
RBAM_032160__    101 EYRTGFVTIGDEVMIGANTTILPGVTIGSGAVVSAGTLVHKDVPAGAFVG    150

BSNT_05323       103 ---------------------    103
                                          
RBAM_032160__    151 GNPMQVIYTDEEMKERMGKPR    171


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