Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05315 and RBAM_032150

See DNA alignment / Visit BSNT_05315 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:45
# Commandline: needle
#    -asequence pep-align/BSNT_05315___yvpB.1.9828.seq
#    -bsequence pep-align/RBAM_032150___yvpB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05315___yvpB-RBAM_032150___yvpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05315___yvpB-RBAM_032150___yvpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05315___yvpB
# 2: RBAM_032150___yvpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     171/250 (68.4%)
# Similarity:   199/250 (79.6%)
# Gaps:           9/250 ( 3.6%)
# Score: 902.5
# 
#
#=======================================

BSNT_05315___      1 MKTLRTLCVLMILSGVIFFGLKIDAKDIDIPFLNSLKKVVSDSDTDSAAN     50
                     ||||.|||||::.:.:::.|..|...||.:.|.|      ..||   ..:
RBAM_032150__      1 MKTLGTLCVLILTAVLVYLGYNIYTNDIHLNFFN------QQSD---EPD     41

BSNT_05315___     51 SKKELKGSAKPLDVILYNQMDAPRLYNGCEVTSLAMVLNYAGYDVTKNTL    100
                     .|..|||||.||:|:||.|||:||||||||||||||:||.|||.|:||||
RBAM_032150__     42 EKTPLKGSASPLNVVLYRQMDSPRLYNGCEVTSLAMILNNAGYHVSKNTL     91

BSNT_05315___    101 ANQIATVPLTYSSGLKGDPNDGFVGDMANGPGLGVYHRPIYQLAKTYAGD    150
                     |::|..||||||||||||||:||.|||.|||||||||.||.:|||.|||:
RBAM_032150__     92 ADKINKVPLTYSSGLKGDPNEGFAGDMENGPGLGVYHEPIDKLAKEYAGN    141

BSNT_05315___    151 KVSDLTGKSISAVYQQLEKGNPVWVITTANFTPVDNMQTWKTPNGTIEIT    200
                     ||.|||||.||:||:|||||.|||||||.:|.||||||||.||||.|::|
RBAM_032150__    142 KVYDLTGKDISSVYRQLEKGRPVWVITTTSFKPVDNMQTWNTPNGKIDVT    191

BSNT_05315___    201 YSEHSVAVTGYDDKYVYLNDPYGYKNRKTDRTSFEKAWKQMGSQAVVIQK    250
                     :|.|||||||||..|||:|||||||||||||:.||||||||||||:||:.
RBAM_032150__    192 FSMHSVAVTGYDHDYVYVNDPYGYKNRKTDRSDFEKAWKQMGSQAIVIKS    241


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