Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05313 and RBAM_032130
See
DNA alignment /
Visit
BSNT_05313 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:45
# Commandline: needle
# -asequence pep-align/BSNT_05313___hisG.1.9828.seq
# -bsequence pep-align/RBAM_032130___hisG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05313___hisG-RBAM_032130___hisG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05313___hisG-RBAM_032130___hisG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05313___hisG
# 2: RBAM_032130___hisG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 196/213 (92.0%)
# Similarity: 203/213 (95.3%)
# Gaps: 6/213 ( 2.8%)
# Score: 998.0
#
#
#=======================================
BSNT_05313___ 1 ------MAMPKGRIFEEAAGLLRQAGYRLPEEFEDSRKLIIDVPEENLRF 44
||||||||||||||||||||||||||||:|||||||||||||||
RBAM_032130__ 1 MGKVLTMAMPKGRIFEEAAGLLRQAGYRLPEEFEESRKLIIDVPEENLRF 50
BSNT_05313___ 45 ILAKPMDVTTYVEHGVADVGIAGKDVMLEEERDVYEVLDLKISKCHLAVA 94
||||||||||||||||||.|||||||||||||||||||||||||||||||
RBAM_032130__ 51 ILAKPMDVTTYVEHGVADAGIAGKDVMLEEERDVYEVLDLKISKCHLAVA 100
BSNT_05313___ 95 GLPNTDWSGVAPRIATKYPNVASSYFREQGEQVEIIKLNGSIELAPLIGL 144
|||..||:||||||||||||||||||||||||||||||||||||||||||
RBAM_032130__ 101 GLPGADWNGVAPRIATKYPNVASSYFREQGEQVEIIKLNGSIELAPLIGL 150
BSNT_05313___ 145 ADRIVDIVSTGQTLKENGLVETEHICDITSRFIVNPVSYRMKDDVIDEMA 194
|||||||||||:|||||||||:||||||||||||||||||||||||||||
RBAM_032130__ 151 ADRIVDIVSTGRTLKENGLVESEHICDITSRFIVNPVSYRMKDDVIDEMA 200
BSNT_05313___ 195 SRLSLVVEGETAK 207
:||:.|||||||:
RBAM_032130__ 201 ARLARVVEGETAQ 213
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.